xflouris / newick-toolsLinks
Visualize and perform a multitude of operations on newick files
☆17Updated 3 years ago
Alternatives and similar repositories for newick-tools
Users that are interested in newick-tools are comparing it to the libraries listed below
Sorting:
- A rapid phylogeny-based method for accurate community profiling of large-scale metabarcoding datasets☆25Updated 9 months ago
- simple and not slow ORF caller☆21Updated 2 months ago
- De novo estimates of genetic relatedness from next-gen sequencing data☆45Updated 6 years ago
- ☆15Updated 7 years ago
- ☆19Updated last year
- Classify sequencing reads using MinHash.☆48Updated 5 years ago
- Ancestral character reconstruction and visualisation for rooted phylogenetic trees☆38Updated last week
- Utility program for extracting sequences from a fasta/fastq file☆35Updated last year
- initial commit☆26Updated 3 years ago
- Validate and edit small eukaryotic genome assemblies☆33Updated 2 years ago
- Detect contigs of complete circular genomes☆23Updated 6 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 4 months ago
- A phylogeny dating method using least-squares algorithms and criteria☆32Updated last year
- Bacterial phylogenetics in BEAST 2.☆18Updated 2 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆33Updated 3 years ago
- Identifying repeats in high-throughput sequencing data☆16Updated last year
- ☆18Updated 3 months ago
- Assembly based core genome SNP alignments for bacteria☆25Updated 6 years ago
- Bayesian gene tree reconciliation and WGD inference using amalgamated likelihood estimation☆16Updated 9 months ago
- ☆11Updated 4 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 6 months ago
- Filter of Pairwise Alignement☆44Updated 4 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 7 years ago
- GATB Minia assembly pipeline☆31Updated 2 years ago
- A pipeline for detecting mis-assemblies in metagenomic assemblies.☆14Updated 8 years ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- ☆21Updated last year
- Read contamination removal☆25Updated 2 years ago
- An `R` package for various phylogenetic and evolutionary biology data manipulations☆12Updated 7 years ago
- Algorithm to divide a phylogenetic tree into segments based on phenotypes at the leaves of the tree☆25Updated 7 years ago