Pipleline for deep centromeres analysis with CENdetectHOR
☆11Aug 24, 2026Updated 2 months ago
Alternatives and similar repositories for CENdetectHOR_pipeline
Users that are interested in CENdetectHOR_pipeline are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A GUI tools for Gap closed based on assembly graph☆14Nov 4, 2025Updated 11 months ago
- Centromere mapping and annotation pipeline☆28Jun 26, 2026Updated 3 months ago
- Some components that speed up and reduce resource cost for original ALLHiC☆15Jun 21, 2025Updated last year
- a gap-filling tools of genome in complex region.☆27Dec 30, 2025Updated 9 months ago
- ☆16Oct 8, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated last year
- The tool is employed for the visualisation of genome-wide contact heatmaps.☆14Apr 14, 2025Updated last year
- ☆26Updated this week
- Misassembly Identifier☆29Sep 5, 2026Updated last month
- Deep Learning Framework for Transposable Element Discovery and Annotation☆12Aug 18, 2026Updated 2 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Sep 25, 2026Updated last month
- ☆31Aug 18, 2026Updated 2 months ago
- ☆21Jul 12, 2026Updated 3 months ago
- ☆17Feb 2, 2026Updated 8 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Dynamic Elongation of a Genome Assembly Path☆31Jul 27, 2026Updated 2 months ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆36Jan 3, 2022Updated 4 years ago
- Evaluating genome assemblies☆128Mar 3, 2026Updated 7 months ago
- ☆16Apr 3, 2023Updated 3 years ago
- Extracting paths from assembly graphs☆26Jun 22, 2026Updated 4 months ago
- An R package to perform systematic quality checks on comparative genomics analyses☆12Mar 5, 2026Updated 7 months ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆43Nov 25, 2024Updated last year
- Graph Variant Benchmarking for the HPRC2☆11May 26, 2026Updated 4 months ago
- Package to Draw NLR Domain Architecture using NLRtracker Output☆17Jul 30, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- The tools are used for displaying hic signal of genome☆25Jan 4, 2021Updated 5 years ago
- A tool for performing collinearity-incorporating homology inference☆34Jul 17, 2026Updated 3 months ago
- An R package to visualize chromosome scale repeat patterns and predict centromere locations.☆51May 8, 2026Updated 5 months ago
- A plant organellar Graphical Fragment Assembly toolkit☆17Oct 15, 2026Updated last week
- ☆10Sep 4, 2024Updated 2 years ago
- EasyHap is a cross-platform toolkit for regional haplotype analysis and visualization using phased VCF data from fungal, plant, and anima…☆21Oct 10, 2026Updated 2 weeks ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆39Sep 17, 2022Updated 4 years ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆32Oct 3, 2026Updated 3 weeks ago
- SV calling for diploid assemblies☆32Mar 22, 2024Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- base-level dotplots from PAF alignments☆36Oct 16, 2026Updated last week
- An easy-to-use python package can be used for genomic visual analysis☆23Apr 20, 2024Updated 2 years ago
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆20Dec 5, 2023Updated 2 years ago
- ☆11Oct 23, 2024Updated 2 years ago
- ☆29May 12, 2026Updated 5 months ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆59Oct 9, 2026Updated 2 weeks ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Oct 17, 2026Updated last week