moold / ParallelTaskLinks
A simple and lightweight parallel task engine
☆35Updated last year
Alternatives and similar repositories for ParallelTask
Users that are interested in ParallelTask are comparing it to the libraries listed below
Sorting:
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated last year
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Updated 2 years ago
- test repository☆29Updated 2 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 7 years ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆45Updated last year
- A program for assessing the T2T genome continuity☆92Updated 3 weeks ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated last month
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated last month
- Tools for improving the sensitivity and specificity of genome alignments☆58Updated last year
- Draw a dot plot from a paf alignment☆35Updated 3 months ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆54Updated 5 months ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆59Updated 4 months ago
- Large genome reassembly based on Hi-C data, continuation of GRAAL☆43Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆69Updated 4 years ago
- Plant genome assembly and annotation pipeline using snakemake☆51Updated 7 months ago
- Chromosome-scale and haplotype-resolved assmebly of tetraploid cultiavetd potato with polyploidy graph binning☆28Updated last year
- An easy-to-use python package can be used for genomic visual analysis☆21Updated last year
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- ☆45Updated 9 years ago
- Nextflow pipeline for scaffolding genome assemblies with Hi-C reads☆16Updated 2 months ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- Portable solution to generate genome alignment chains using lastz☆60Updated 3 weeks ago
- MCHelper: An automatic tool to curate transposable element libraries☆45Updated 6 months ago
- ☆47Updated last month
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…☆24Updated 2 years ago
- A battery of methylation tools for PacBio HiFi reads☆46Updated last month
- Error correction of ONT transcript reads☆58Updated 2 years ago