moold / ParallelTaskLinks
A simple and lightweight parallel task engine
☆35Updated last year
Alternatives and similar repositories for ParallelTask
Users that are interested in ParallelTask are comparing it to the libraries listed below
Sorting:
- Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.☆56Updated 2 weeks ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆27Updated 7 years ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated last year
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆68Updated 4 years ago
- Portable solution to generate genome alignment chains using lastz☆60Updated last month
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- A fast tool for detecting and decomposing segmental duplications in genome assemblies☆55Updated 6 months ago
- An easy-to-use python package can be used for genomic visual analysis☆21Updated last year
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Updated 2 years ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆45Updated last year
- DNA序列比对结果 可视化展示工具☆47Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- Plant genome assembly and annotation pipeline using snakemake☆52Updated 8 months ago
- A pipeline for isoseq☆23Updated 7 years ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on Pore-C, HiFi-C/CiFi or Hi-C.☆85Updated last week
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Updated 2 years ago
- BITACORA: A Bioinformatics tool for gene family annotation☆53Updated last month
- A program for assessing the T2T genome continuity☆92Updated last month
- Large genome reassembly based on Hi-C data, continuation of GRAAL☆43Updated last year
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆36Updated 3 years ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Updated 2 years ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆37Updated last year
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- Draw a dot plot from a paf alignment☆37Updated 4 months ago
- ☆44Updated last year
- perSVade: personalized Structural Variation detection☆40Updated 2 weeks ago
- TGS scaffolding☆47Updated 4 years ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".☆29Updated 4 years ago