Simple App to visualize single cell datasets
☆20Apr 12, 2018Updated 7 years ago
Alternatives and similar repositories for CellView
Users that are interested in CellView are comparing it to the libraries listed below
Sorting:
- Differential Expression with Capture Efficiency adjustmeNT☆15Jan 3, 2023Updated 3 years ago
- Marker gene selection from scRNA-seq data☆16Sep 15, 2020Updated 5 years ago
- Probabilistic pseudotime for single-cell RNA-seq data☆11Oct 6, 2017Updated 8 years ago
- Shiny app for the analysis of single cell data☆26Nov 11, 2025Updated 4 months ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11May 25, 2023Updated 2 years ago
- Material for lecture at the EMBL Single Cell Course 2016☆47Apr 7, 2016Updated 9 years ago
- ☆21Aug 30, 2018Updated 7 years ago
- ☆38Jul 26, 2016Updated 9 years ago
- Cluster Identity Predictor (R package implementation)☆21Mar 8, 2022Updated 4 years ago
- ☆16Apr 17, 2024Updated last year
- R package for Bioconductor submission☆39Dec 8, 2022Updated 3 years ago
- Non-official Git repository for R package cellrangerRkit (currently not available elsewhere; I'm not affiliated with 10x)☆19May 6, 2019Updated 6 years ago
- Statistical approach for removing unwanted variation from multiple single-cell datasets☆71Apr 12, 2024Updated last year
- Makes plotting flow cytometry data easy and pretty. This package reads flowFrame objects and plots them in beautiful scatter plots using…☆15Mar 2, 2015Updated 11 years ago
- Probabilistic gene expression barcodes for cell type annotation☆26Apr 26, 2022Updated 3 years ago
- Extracellular vesicle-derived miRNA-mediated cell-cell communication inference for single-cell transcriptomic data☆18Apr 15, 2025Updated 11 months ago
- ☆25May 7, 2022Updated 3 years ago
- A framework to infer mutational signatures in cancer over time☆56Jul 9, 2019Updated 6 years ago
- ☆23Jul 9, 2025Updated 8 months ago
- Feature selection for preserving biological trajectories in single-cell data☆21May 29, 2025Updated 9 months ago
- A program for summarising CpG methylation patterns☆20Sep 9, 2016Updated 9 years ago
- Publication Page for ArchR Manuscript 2020☆23Aug 17, 2021Updated 4 years ago
- ☆10Apr 29, 2023Updated 2 years ago
- ☆12Jul 13, 2018Updated 7 years ago
- Dissecting the effects of DNA copy number variations on transcriptional programs at single-cell resolution☆13Feb 13, 2026Updated last month
- ggplot2 extension to add a table to an axis.☆13May 29, 2021Updated 4 years ago
- ☆12May 17, 2022Updated 3 years ago
- ☆32Jan 22, 2026Updated last month
- ☆10Jan 24, 2021Updated 5 years ago
- Raw data and analysis of scRNA Seq experiments for the paper Multimodal Mapping of the Immune Landscape in Human Pancreatic Cancer. This …☆15Nov 30, 2020Updated 5 years ago
- ☆10Apr 6, 2022Updated 3 years ago
- An r interface to perform ROMA☆10Aug 24, 2018Updated 7 years ago
- ☆10Nov 29, 2022Updated 3 years ago
- Analogue and weighted averaging methods for palaeoecology☆14Jun 25, 2025Updated 8 months ago
- A Julia package for single cell and spatial data analysis☆46Aug 7, 2025Updated 7 months ago
- Toolkit for single-cell analysis of chromatin accessibility☆12Feb 27, 2020Updated 6 years ago
- A package to help convert different single-cell data formats to each other☆460Feb 20, 2026Updated last month
- Highly scalable integration and classification of single-cell RNA sequencing data☆11Dec 27, 2020Updated 5 years ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆141Mar 13, 2026Updated last week