mohanbolisetty / CellViewLinks
Simple App to visualize single cell datasets
☆20Updated 7 years ago
Alternatives and similar repositories for CellView
Users that are interested in CellView are comparing it to the libraries listed below
Sorting:
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago
- An R shiny based tool used for single cell RNA-seq data visualization and analysis.☆33Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- ☆41Updated 4 years ago
- An R package for handling and analysing imaging mass cytometry data☆26Updated last week
- Mouse cell atlas☆59Updated 5 years ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆38Updated 3 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆65Updated 7 months ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data.☆42Updated 8 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆52Updated last month
- Trajectory inference and differential expression over multiple conditions in scRNA-seq☆24Updated 4 years ago
- Using self-organizing maps for visualization and interpretation of cytometry data☆28Updated 2 months ago
- Cell type pipes for R☆51Updated last year
- This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.☆21Updated 2 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆40Updated 2 years ago
- The SpatialDecon library implements the SpatialDecon algorithm for mixed cell deconvolution in spatial gene expression datasets. (This al…☆39Updated 2 weeks ago
- A tool for unsupervised projection of single cell RNA-seq data☆96Updated 4 years ago
- R package for decontaminating the spot swapping effect and recovering true expression in spatial transcriptomics data☆33Updated 11 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated last month
- COMET Single-Cell Marker Detection tool☆31Updated 2 years ago
- An r package that works as a wrapper to homologene☆45Updated last year
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆28Updated 6 months ago
- An R-based interface for loom files☆66Updated 4 years ago
- Framework for sensitive DE testing (using neighbourhoods)☆68Updated 10 months ago
- R Data: Single cell RNA sequencing of human liver reveals distinct intrahepatic macrophage populations☆28Updated 5 years ago
- ☆61Updated 5 years ago
- simpler single cell RNAseq data clustering☆40Updated 3 months ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆44Updated 9 years ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆31Updated 6 months ago