Simon-Leonard / FlexDotPlot
R package for Flexible dot plots
☆29Updated 2 years ago
Alternatives and similar repositories for FlexDotPlot:
Users that are interested in FlexDotPlot are comparing it to the libraries listed below
- An R package for visualising cell-cell interactions☆43Updated 5 months ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆19Updated 2 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆34Updated 3 years ago
- An r package that works as a wrapper to homologene☆42Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 4 years ago
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆31Updated 3 years ago
- ☆40Updated 6 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆26Updated 4 years ago
- Network analysis for multi-omics☆13Updated 2 weeks ago
- Single-cell analysis with non-negative matrix factorization☆42Updated 2 months ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆15Updated 3 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- ConsensusTME Gene Sets and R Script☆39Updated 7 months ago
- Cluster Identity Predictor (R package implementation)☆19Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆30Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆26Updated 6 months ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆22Updated 2 years ago
- Code to reproduce TNBC analysis and figures☆23Updated 2 years ago
- ☆29Updated 6 years ago
- GLASS consortium☆13Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆36Updated 2 years ago
- Toolkit for Single-Cell Velocity☆54Updated 2 weeks ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆29Updated 6 months ago
- ☆29Updated last year
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆33Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 2 months ago
- Network construction Algorithm☆20Updated 4 months ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 2 years ago