Gartner-Lab / deMULTIplex2Links
deMULTIplex2: robust sample demultiplexing for scRNA-seq
☆14Updated 4 months ago
Alternatives and similar repositories for deMULTIplex2
Users that are interested in deMULTIplex2 are comparing it to the libraries listed below
Sorting:
- Data and analysis scripts for our Embryo Timecourse paper.☆68Updated 5 years ago
- Functional Inference of Gene Regulation☆45Updated last year
- Single cell RNA-seq analysis bundle☆35Updated 5 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆107Updated 3 months ago
- ☆25Updated 4 months ago
- R package for pathway analysis in scRNA-seq data☆75Updated 11 months ago
- ☆68Updated last year
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆62Updated last year
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated last year
- R implementation of MULTI-seq sample classification workflow☆63Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆107Updated 2 months ago
- Tools used in Human Cell Landscape(HCL)☆55Updated 4 years ago
- ☆53Updated 9 months ago
- Direct estimation of mean and covariance from single cell RNA seq experiments☆111Updated 2 months ago
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆32Updated last year
- Aligning gene expression trajectories of single-cell reference and query systems☆69Updated 9 months ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- Analysis of cell-cell communication at single-cell resolution☆101Updated 10 months ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆75Updated 2 months ago
- marker-based purification of cell types from single-cell RNA-seq datasets☆116Updated 2 months ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆105Updated 2 years ago
- Single-nuclei RNA-seq and ATAC-seq in Alzheimer's disease☆95Updated 4 years ago
- Single Cell Analysis of Five'Ends☆50Updated last year
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 2 months ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 2 months ago
- wrapper scripts for convenient STARsolo processing of 10X and other scRNA-seq☆60Updated last month
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Single Cell Cluster Evaluation☆94Updated 3 years ago
- ☆41Updated last month
- Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.☆78Updated 3 months ago