hb-gitified / cellrangerRkitLinks
Non-official Git repository for R package cellrangerRkit (currently not available elsewhere; I'm not affiliated with 10x)
☆19Updated 6 years ago
Alternatives and similar repositories for cellrangerRkit
Users that are interested in cellrangerRkit are comparing it to the libraries listed below
Sorting:
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Differential Expression with Capture Efficiency adjustmeNT☆14Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 8 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Gene-level general linear mixed model☆23Updated 2 months ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- Exon-Intron Split Analysis (EISA) in R☆17Updated last month
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 3 months ago
- ☆63Updated 9 months ago
- Repository for supplemental material of manuscripts☆18Updated 4 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Perform differential expression analysis on cohort-scale single cell datasets using linear mixed models☆20Updated 2 months ago
- See: https://www.iscb.org/ismb2018/3511#am1☆18Updated 7 years ago
- satuRn is a highly performant and scalable method for performing differential transcript usage analyses.☆22Updated 2 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 6 years ago
- distinct: a method for differential analyses via hierarchical permutation tests☆11Updated 2 years ago
- A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v…☆32Updated 5 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆40Updated last year
- Transcript quantification import with automatic metadata detection☆67Updated last week
- An r package that works as a wrapper to homologene☆47Updated 2 years ago
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated last month
- R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)☆22Updated 6 years ago