mobie / mobie-viewer-fijiLinks
☆36Updated this week
Alternatives and similar repositories for mobie-viewer-fiji
Users that are interested in mobie-viewer-fiji are comparing it to the libraries listed below
Sorting:
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- Command-line client for Fractal☆46Updated last week
- MethodsJ2☆14Updated 3 years ago
- A minimal Python package for reading OME-Zarr (meta)data☆29Updated this week
- Visualizing feature measurements on label images in napari☆10Updated 10 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆17Updated last month
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆22Updated 2 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last month
- ☆23Updated 3 weeks ago
- A 3D interactivity toolbox for napari☆34Updated last month
- Basic example of using OME-Zarr in a Nextflow pipeline☆16Updated 6 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated last month
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆28Updated last week
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- A napari plugin for zarr backed OME-NGFF images☆33Updated this week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆52Updated 7 months ago
- A writer and reader for NGFF OME-Zarr datasets☆14Updated 3 years ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 6 months ago
- GIve easy, high-level access to ome-zarr fileset☆16Updated 2 weeks ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated last month
- ilastik plugin for napari☆14Updated last year
- Browse your OMERO database from within napari.☆37Updated this week
- Multiple file format reading directly into napari using pure Python☆36Updated 10 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated 2 months ago
- Track and lineage visualization with btrack and Napari☆45Updated 7 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆17Updated last month
- NGIO is a Python library to streamline OME-Zarr image analysis workflows.☆14Updated last week
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆14Updated last week
- A platform for compiling, analyzing, and exploring tracking data☆44Updated 2 months ago
- StarDist plugin for napari☆38Updated 9 months ago