The known BioVoxxel Toolbox functions now improved for 2D and 3D images
☆21Feb 10, 2026Updated 8 months ago
Alternatives and similar repositories for bv3dbox
Users that are interested in bv3dbox are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆13Jan 24, 2022Updated 4 years ago
- Resources for teaching/preparing to teach bioimage analysis☆65Oct 5, 2026Updated last week
- ☆13Feb 5, 2026Updated 8 months ago
- ☆13Jun 17, 2026Updated 4 months ago
- MiC is an ImageJ plugin to compare segmentation masks☆21Sep 14, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆26Nov 25, 2025Updated 10 months ago
- An ImageJ/Fiji plugin designed to effortlessly integrate Segment-Anything models (SAMs) without code.☆102Updated this week
- SciCount is tool focused on counting and classifying of objects in image-like data and scientific images, with training and example datas…☆11Oct 24, 2023Updated 2 years ago
- napari widgets for start-to-finish batch processing☆15Jun 1, 2026Updated 4 months ago
- Modular image and object analysis workflows for ImageJ/Fiji☆17Updated this week
- 7 sessions workshop about bioimage analysis☆14Nov 24, 2025Updated 10 months ago
- StarDist plugin for ImageJ☆32May 9, 2022Updated 4 years ago
- ☆24Aug 26, 2026Updated last month
- napari plugin for trackastra☆19Jul 16, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31Updated this week
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 2 months ago
- ☆13Mar 26, 2025Updated last year
- An introduction to bioimage analysis - http://bioimagebook.github.io☆76Feb 5, 2026Updated 8 months ago
- Python program to generate NetworkX graphs from segmented images.☆15Apr 14, 2023Updated 3 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Sep 11, 2021Updated 5 years ago
- ExTrack MLE for diffusive noisy single-particle tracks☆16Sep 18, 2026Updated last month
- #ZVQ - Zebrafish Vascular Quantification - https://doi.org/10.1242/dev.199720☆11May 24, 2023Updated 3 years ago
- StarDist plugin for napari☆42Aug 24, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- A Board Game to teach co-localization analysis☆16Nov 1, 2024Updated last year
- ImageJ plugins to run ilastik workflows☆31Mar 9, 2026Updated 7 months ago
- Guides and code for 3D nuclear instance segmentation☆24Dec 2, 2025Updated 10 months ago
- ☆27Sep 11, 2026Updated last month
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated 2 years ago
- ☆22Aug 17, 2023Updated 3 years ago
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆126May 22, 2026Updated 4 months ago
- ☆15Jul 29, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- User-affordable and versatile light-sheet microscopy system for cleared specimens☆29Mar 14, 2025Updated last year
- Computational workflows to assess phototoxicity in live-cell microscopy experiments☆11Aug 11, 2026Updated 2 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆26Jun 3, 2026Updated 4 months ago
- ☆12Mar 18, 2024Updated 2 years ago
- ☆52May 1, 2025Updated last year
- ilastik plugin for napari☆15Mar 2, 2026Updated 7 months ago