biovoxxel / bv3dboxLinks
The known BioVoxxel Toolbox functions now improved for 2D and 3D images
☆17Updated 3 months ago
Alternatives and similar repositories for bv3dbox
Users that are interested in bv3dbox are comparing it to the libraries listed below
Sorting:
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- A platform for compiling, analyzing, and exploring tracking data☆47Updated 2 months ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated last year
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆22Updated 11 months ago
- Training resources for Students at Uni Leipzig who want to dive into bio-image data science with Python. The material will develop betwee…☆39Updated last year
- Process images using SimpleITK in napari☆22Updated 5 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated 2 weeks ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 11 months ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- Z-stack Depth Colorcode ImageJ FIJI plugin☆25Updated last month
- Guides and code for 3D nuclear instance segmentation☆22Updated 4 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Updated 3 weeks ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Updated 3 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated this week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆16Updated 3 months ago
- The repository of NEUBIAS textbook 2021☆11Updated 3 years ago
- MultiModal Big Image Data Sharing and Exploration☆17Updated 2 years ago
- StarDist plugin for napari☆39Updated last year
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated 6 months ago
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- Lectures for a napari training course☆51Updated 2 years ago
- Track and lineage visualization with btrack and Napari☆46Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆58Updated 3 months ago
- ☆51Updated 5 months ago
- A napari plugin for clustering objects according to their properties.☆88Updated this week
- ☆19Updated 5 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last week
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆39Updated 5 months ago