Alternatives and similar repositories for pydantic-ome-ngff:

Users that are interested in pydantic-ome-ngff are comparing it to the libraries listed below

• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆32Updated this week
• czbiohub-sf / iohub
  Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata
  ☆34Updated this week
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆33Updated 3 months ago
• ome-zarr-models / ome-zarr-models-py
  A minimal Python package for reading OME-Zarr (meta)data
  ☆23Updated 2 weeks ago
• spatial-image / multiscale-spatial-image
  Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.
  ☆42Updated last month
• ome / ome2024-ngff-challenge
  Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data
  ☆19Updated 2 weeks ago
• aeisenbarth / ngff-writer
  A writer and reader for NGFF OME-Zarr datasets
  ☆14Updated 3 years ago
• Euro-BioImaging / BatchConvert
  A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…
  ☆21Updated last week
• thewtex / ngff-zarr
  A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.
  ☆32Updated last month
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆23Updated last week
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆55Updated 2 weeks ago
• ome / omero-cli-zarr
  ☆16Updated this week
• fmicompbio / ez_zarr
  GIve easy, high-level access to ome-zarr fileset
  ☆14Updated this week
• JaneliaSciComp / zarrcade
  Create web-based OME-Zarr galleries
  ☆15Updated last month
• fractal-analytics-platform / fractal-client
  Command-line client for Fractal
  ☆45Updated this week
• constantinpape / pybdv
  python tools for BigDataViewer
  ☆22Updated 2 months ago
• PolusAI / bfio
  Interface to the Bioformats Java library
  ☆13Updated 2 months ago
• allen-cell-animated / agave
  ☆41Updated last week
• morphometrics / morphometrics
  ☆20Updated last year
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆26Updated this week
• pyapp-kit / ndv
  Simple, fast-loading, n-dimensional array viewer with minimal dependencies.
  ☆62Updated this week
• JaneliaSciComp / xarray-multiscale
  scalable multiscale image pyramids in python
  ☆27Updated 7 months ago
• multiview-stitcher / napari-stitcher
  A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher
  ☆15Updated last week
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆12Updated 2 weeks ago
• ilastik / ilastik-napari
  ilastik plugin for napari
  ☆14Updated 11 months ago
• BioImageTools / ome-zarr-image-analysis-nextflow
  Basic example of using OME-Zarr in a Nextflow pipeline
  ☆16Updated 4 months ago
• andy-sweet / napari-metadata
  A napari plugin to view and edit metadata
  ☆10Updated last year
• bigdataprocessor / bigdataprocessor2
  ☆20Updated last month
• fractal-napari-plugins-collection / napari-feature-classifier
  ☆23Updated 6 months ago