simple standalone BigDataViewer for multiple N5 (or HDF5) datasets
☆12Mar 6, 2026Updated 5 months ago
Alternatives and similar repositories for n5-utils
Users that are interested in n5-utils are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆21Updated this week
- A tool for manual pointwise deformable registration using bigdataviewer.☆37Aug 6, 2026Updated last week
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆21Jul 10, 2026Updated last month
- browsing large volumetric data and shapes☆21Aug 6, 2026Updated last week
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆26Jun 13, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆15Jul 17, 2026Updated 3 weeks ago
- MultiModal Big Image Data Sharing and Exploration☆20Jan 13, 2023Updated 3 years ago
- ☆116Updated this week
- Shell scripts for scientific projects written in Java☆17Jul 18, 2026Updated 3 weeks ago
- Algorithmic and Utility Extensions for the Imaris Program☆21Jul 26, 2026Updated 2 weeks ago
- A pilot experiment to dissminate information about Janelia's biomaging data formats.☆12Jan 30, 2025Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 2 weeks ago
- ☆45Jul 31, 2026Updated 2 weeks ago
- Icons describing multiple microscopy techniques, as used by https://www.epfl.ch/research/facilities/ptbiop/equipment/☆11Mar 13, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- StarDist plugin for ImageJ☆32May 9, 2022Updated 4 years ago
- An Ilastik-like interactive pixel classifier.☆16Sep 5, 2024Updated last year
- ClearVolume is a real-time live 3D visualization library designed for high-end volumetric microscopes such as SPIM and DLSM microscopes. …☆48Jun 11, 2026Updated 2 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆11May 3, 2023Updated 3 years ago
- CLIJ is deprecated. Visit CLIJ2☆57Jun 12, 2021Updated 5 years ago
- Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.☆82Jun 27, 2026Updated last month
- ☆23Apr 1, 2026Updated 4 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31May 28, 2026Updated 2 months ago
- python tools for BigDataViewer☆23Jul 2, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- GDSC Single Molecule Light Microscopy ImageJ Plugins☆17Updated this week
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Oct 8, 2025Updated 10 months ago
- ☆11Sep 19, 2015Updated 10 years ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Oct 30, 2017Updated 8 years ago
- Code and data belonging to "Raw data to results: a hands-on introduction and overview of computational analysis for single-molecule local…☆11Mar 7, 2022Updated 4 years ago
- ImageJ convenience layer for N5☆21Jun 29, 2026Updated last month
- Official Python implementation of the 'Sparse deconvolution'-v0.3.0☆57Feb 8, 2024Updated 2 years ago
- ☆24Sep 13, 2025Updated 11 months ago
- sciview is a tool for visualization and interaction with ND image and mesh data☆76Jul 24, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Create 3D/4D animations using a natural language-based syntax☆60Jun 6, 2025Updated last year
- ImgLib2-based viewer for registered SPIM stacks and more☆44Jul 23, 2026Updated 3 weeks ago
- Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data☆34Updated this week
- PSFj - Know your microscope fluorescence☆24Mar 6, 2020Updated 6 years ago
- Plug-in inkscape for XYZ plotter kit to generate Gcode inside Inkscape☆13Aug 16, 2021Updated 4 years ago
- ☆14Jan 26, 2021Updated 5 years ago
- Online documentation and reference for CLIJ☆28May 21, 2021Updated 5 years ago