haesleinhuepf / imagejmacromarkdown
Generate markdown notebooks from ImageJ Macro
☆24Updated 4 years ago
Alternatives and similar repositories for imagejmacromarkdown:
Users that are interested in imagejmacromarkdown are comparing it to the libraries listed below
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 5 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- Z-stack Depth Colorcode ImageJ FIJI plugin☆24Updated 4 years ago
- ☆19Updated 3 years ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆22Updated 3 years ago
- Lectures for a napari training course☆50Updated last year
- A platform for compiling, analyzing, and exploring tracking data☆43Updated last month
- An R package to detect collective spatio-temporal phenomena☆12Updated 4 months ago
- ☆10Updated 4 months ago
- A napari plugin to analysis point spread functions.☆12Updated 2 weeks ago
- Detection of Molecules plugin for ImageJ, Utrecht University☆15Updated 2 years ago
- Commands and Classes for interfacing between Imaris and Fiji☆12Updated 6 months ago
- ☆12Updated 5 years ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆36Updated last month
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 6 months ago
- NEUBIAS Academy @Home: Interactive Bioimage Analysis with Python and Jupyter☆62Updated last year
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 4 months ago
- Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆16Updated last month
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆25Updated 2 years ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆16Updated last month
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆24Updated 6 months ago
- ☆15Updated last year
- Handmade ImageJ / Fiji LUTs for microscopy, scientific good visualization and art.☆11Updated 3 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 3 months ago
- ☆12Updated 11 months ago
- ImageJ convenience layer for N5☆16Updated last week
- ☆13Updated 4 years ago
- ☆47Updated 5 months ago