brainglobe / napari-brainreg
Visualise brainreg registration output
☆10Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for napari-brainreg
- Read and write files from the BrainGlobe neuroanatomy suite☆13Updated this week
- Registration to BrainGlobe atlases in napari using Elastix☆13Updated this week
- Automated 3D brain registration in napari with support for multiple species and atlases.☆15Updated 10 months ago
- Loading and saving of image data.☆10Updated 9 months ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 3 years ago
- Segmentation of anatomical structures in a common coordinate space☆28Updated this week
- Brainways☆14Updated this week
- How to use Aligning Big Brains and Atlases with Python☆13Updated last year
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆20Updated this week
- Efficient cell detection in large images using cellfinder in napari☆24Updated 10 months ago
- Re-usable GitHub Action scripts☆10Updated this week
- ☆10Updated last year
- Visualisation and exploration of brain atlases☆9Updated 4 years ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 3 years ago
- Rendering anatomical heatmaps with brainrender and matplotlib☆34Updated this week
- Standalone cellfinder cell detection algorithm☆19Updated 10 months ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆16Updated 11 months ago
- Code for recreating the figures in the brainrender paper (Claudi et al. 2020)☆12Updated 3 years ago
- General information, resources and dicussions for the BrainGlobe project.☆10Updated 11 months ago
- A tool to streamline extracellular electrophysiology analysis using SpikeInterface☆13Updated this week
- Fancier logging with python.☆12Updated this week
- ☆18Updated 2 years ago
- A lightweight python package to download neuronal morphologies☆17Updated this week
- Napari plugin for working with video files.☆13Updated 3 weeks ago
- MultiModal Big Image Data Sharing and Exploration☆12Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆15Updated 3 weeks ago
- Tool for the creation, validation and transfer of neuroscience project folders.☆15Updated this week
- Process images using SimpleITK in napari☆19Updated 3 weeks ago
- Running compute-intense parts of BigStitcher distributed☆18Updated this week