juglab / featureforestLinks
A napari plugin for making image annotation using feature space of vision transformers and Random Forest classifier
☆19Updated last month
Alternatives and similar repositories for featureforest
Users that are interested in featureforest are comparing it to the libraries listed below
Sorting:
- Ngio is a Python library to streamline OME-Zarr image analysis workflows.☆18Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆28Updated 3 months ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆78Updated 2 weeks ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆16Updated 4 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 3 weeks ago
- Spotiflow plugin for napari☆12Updated 2 months ago
- A template repo used to make new napari plugins☆26Updated this week
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari☆24Updated 4 months ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 6 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆57Updated 3 weeks ago
- Multi-Object Tracker using Integer Linear Equations☆37Updated this week
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆16Updated 4 months ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- A napari plugin to view and edit metadata☆10Updated 2 years ago
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated 2 weeks ago
- ☆11Updated last week
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 11 months ago
- Python libraries for loading, running and packaging bioimage.io models☆33Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 4 months ago
- dask empowered fast4dreg☆11Updated 9 months ago
- ☆51Updated 3 months ago
- Segment images by pixel classification based on pre-trained convolutional layer feature extraction☆37Updated 4 months ago
- Annotate microscopy images for CNN classifier☆11Updated 3 years ago
- A napari plugin to analysis point spread functions.☆13Updated 5 months ago
- Browse your OMERO database from within napari.☆38Updated 3 weeks ago
- python tools for BigDataViewer☆22Updated 8 months ago
- A plugin to read whole slide images within napari.☆21Updated 6 months ago
- Tools for handling FIB-SEM data and annotations☆22Updated 4 months ago