ahklemm / ImageJMacro_IntroductionLinks
A first intoduction to scripting in Fiji using the ImageJ Macro language.
☆26Updated last year
Alternatives and similar repositories for ImageJMacro_Introduction
Users that are interested in ImageJMacro_Introduction are comparing it to the libraries listed below
Sorting:
- Generate markdown notebooks from ImageJ Macro☆26Updated 4 years ago
- The ImageJ wiki☆28Updated last week
- some useful function to get Label from ROIs and vice versa , and more!☆11Updated 2 years ago
- A platform for compiling, analyzing, and exploring tracking data☆48Updated last week
- Lectures for a napari training course☆50Updated 2 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆55Updated 9 months ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Updated 2 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆19Updated 2 months ago
- ☆51Updated 9 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 9 months ago
- StarDist plugin for napari☆38Updated last year
- This is the repository for a Python bioimage analysis course which establishes the fundamentals of image analysis in the context of biolo…☆135Updated 5 years ago
- Imagej toolset to ease hyperstacks visualization and handling☆23Updated last year
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆18Updated 4 months ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Updated last year
- ☆20Updated 4 years ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 3 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆46Updated 2 months ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Updated 6 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆29Updated this week
- MultiModal Big Image Data Sharing and Exploration☆18Updated 3 years ago
- Python scripts library for Aivia. Ask your questions on the forum >>☆14Updated this week
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆40Updated last month
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Updated 4 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Updated 2 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- QuPath extension for Cellsparse☆19Updated 9 months ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 8 years ago