saalfeldlab / paintera
☆101Updated last week
Alternatives and similar repositories for paintera:
Users that are interested in paintera are comparing it to the libraries listed below
- ImgLib2/BDV implementation of Stitching for large datasets☆69Updated this week
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆18Updated last year
- ImgLib2-based viewer for registered SPIM stacks and more☆38Updated 2 months ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆33Updated last month
- Read and write ImageJ ROI format.☆68Updated 4 months ago
- Tools for distributed alignment of massive images☆79Updated 2 weeks ago
- The ImageJ wiki☆27Updated this week
- CLIJ is deprecated. Visit CLIJ2☆56Updated 3 years ago
- Fiji plugins for starting BigDataViewer and exporting data.☆21Updated 4 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆50Updated 3 weeks ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆28Updated this week
- Reconstruct big images from overlapping tiled images on a Spark cluster.☆35Updated last year
- Image reading, metadata management, and image writing for Microscopy images in Python☆68Updated 2 weeks ago
- The ImageJ framework for quantification of neuronal anatomy☆44Updated last week
- Helpers to use BigDataViewer as a quick visualization tool in other projects.☆25Updated 7 months ago
- ☆29Updated this week
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated last month
- StarDist plugin for napari☆37Updated 5 months ago
- A napari plugin for making animations☆81Updated 4 months ago
- A tool for manual pointwise deformable registration using bigdataviewer.☆27Updated 3 weeks ago
- Specification for the bioimage.io model description file.☆19Updated this week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆61Updated last week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 3 months ago
- A napari plugin for clustering objects according to their properties.☆82Updated this week
- StarDist plugin for ImageJ☆27Updated 2 years ago
- Browse your OMERO database from within napari.☆35Updated 2 weeks ago
- Create 3D/4D animations using a natural language-based syntax☆58Updated last year
- Simple Maven project for an ImageJ2 command☆30Updated 2 years ago
- Lectures for a napari training course☆50Updated last year
- Accelerated Pixel and Object Classifiers (APOC)☆54Updated 2 years ago