saalfeldlab / painteraLinks
☆108Updated this week
Alternatives and similar repositories for paintera
Users that are interested in paintera are comparing it to the libraries listed below
Sorting:
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated this week
- Tools for distributed alignment of massive images☆85Updated 2 weeks ago
- Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ☆26Updated 3 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 5 months ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆19Updated 2 years ago
- Specification for the bioimage.io model description file.☆21Updated last week
- A napari plugin for making animations☆87Updated 2 weeks ago
- Utils and convenience functions for large-scale bio-image analysis.☆57Updated last week
- Browse your OMERO database from within napari.☆38Updated this week
- StarDist plugin for napari☆40Updated 11 months ago
- Read and write ImageJ ROI format.☆75Updated 3 months ago
- ImgLib2-based viewer for registered SPIM stacks and more☆40Updated this week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last week
- Cookiecutter for napari plugins☆69Updated 9 months ago
- Wrappers for external software calls (Cellpose, Elastix, Ilastix...) and java utilities (object conversions and display)☆37Updated 2 months ago
- StarDist plugin for ImageJ☆31Updated 3 years ago
- ☆37Updated this week
- ☆46Updated this week
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- ☆51Updated 3 months ago
- ImageJ convenience layer for N5☆17Updated last week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆51Updated 3 months ago
- Particle tracking by solving linear assignment problem.☆57Updated last week
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 3 months ago
- Interactive image stack viewing in jupyter notebooks based on ipycanvas and ipywidgets☆166Updated 2 months ago
- Multiple file format reading directly into napari using pure Python☆37Updated last year
- ☆36Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆28Updated 3 months ago
- A napari plugin for zarr backed OME-NGFF images☆33Updated this week
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆78Updated last month