bioimage-io / bioimage-io-resourcesLinks
Model repository for bioimage.io
☆17Updated 2 years ago
Alternatives and similar repositories for bioimage-io-resources
Users that are interested in bioimage-io-resources are comparing it to the libraries listed below
Sorting:
- Easily read and write ome-tiff images in python☆27Updated last year
- ☆37Updated this week
- Website for the BioImage Model zoo -- a model zoo for bioimage analysis.☆60Updated 2 months ago
- Python image segmentation plugin☆31Updated 4 years ago
- ImgLib2/BDV implementation of Stitching for large datasets☆74Updated 3 weeks ago
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated last month
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Updated 4 months ago
- Yet Another Pixel Classifier (based on deep learning)☆36Updated last year
- Read and write life sciences file formats☆140Updated 2 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆51Updated 4 months ago
- SplineDist: Automated Cell Segmentation with Spline Curves☆67Updated 11 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 4 months ago
- AICS Segmentation (One-Way) Mirror☆45Updated 4 years ago
- StarDist plugin for napari☆39Updated last year
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 6 months ago
- Process images using SimpleITK in napari☆21Updated 4 months ago
- Resources for teaching/preparing to teach bioimage analysis☆58Updated last week
- ☆22Updated 4 years ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- The ImageJ plugin to run deep-learning models☆98Updated last month
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆35Updated 2 years ago
- Specification for the bioimage.io model description file.☆21Updated 3 weeks ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆44Updated 4 months ago
- Multiple file format reading directly into napari using pure Python☆37Updated last year
- ☆12Updated 4 years ago
- Utils and convenience functions for large-scale bio-image analysis.☆58Updated last month
- Track and lineage visualization with btrack and Napari☆45Updated 10 months ago
- A first intoduction to scripting in Fiji using the ImageJ Macro language.☆26Updated 11 months ago
- Running compute-intense parts of BigStitcher distributed☆26Updated this week
- MethodsJ2☆14Updated 3 years ago