Alternatives and similar repositories for mixOmics

Users that are interested in mixOmics are comparing it to the libraries listed below

• noriakis / ggkegg
  Analyzing and visualizing KEGG information using the grammar of graphics
  ☆229Updated last month
• alserglab / fgsea
  Fast Gene Set Enrichment Analysis
  ☆397Updated 3 weeks ago
• YuLab-SMU / enrichplot
  Visualization of Functional Enrichment Result
  ☆243Updated 2 weeks ago
• YuLab-SMU / ChIPseeker
  ChIP peak Annotation, Comparison and Visualization
  ☆234Updated last month
• cxli233 / SimpleTidy_GeneCoEx
  A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
  ☆201Updated 10 months ago
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆120Updated 4 years ago
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆172Updated last month
• kevinblighe / EnhancedVolcano
  Publication-ready volcano plots with enhanced colouring and labeling
  ☆429Updated 11 months ago
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆259Updated 3 months ago
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆136Updated last month
• saezlab / decoupleR
  R package to infer biological activities from omics data using a collection of methods.
  ☆248Updated 2 months ago
• YuLab-SMU / MicrobiotaProcess
  A comprehensive R package for deep mining microbiome
  ☆187Updated last month
• bioFAM / MOFA2
  Multi-Omics Factor Analysis
  ☆331Updated 10 months ago
• ropensci / biomartr
  Genomic Data Retrieval with R
  ☆222Updated 3 months ago
• PoisonAlien / maftools
  Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.
  ☆462Updated 2 weeks ago
• bernatgel / karyoploteR
  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
  ☆311Updated last year
• Olink-Proteomics / OlinkRPackage
  Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…
  ☆108Updated this week
• egeulgen / pathfindR
  pathfindR: Enrichment Analysis Utilizing Active Subnetworks
  ☆190Updated 2 months ago
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆163Updated 2 years ago
• hbctraining / DGE_workshop_salmon
  ☆72Updated 3 years ago
• thelovelab / DESeq2
  Differential expression of RNA-seq data using the Negative Binomial
  ☆388Updated 2 months ago
• OSCA-source / OSCA
  The package wrapping the book, for deployment via the Bioconductor build system.
  ☆84Updated 6 months ago
• hbctraining / Intro-to-DGE
  ☆194Updated last month
• stemangiola / tidyseurat
  Seurat meets tidyverse. The best of both worlds.
  ☆160Updated 9 months ago
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆212Updated 7 months ago
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆123Updated last week
• yiluheihei / microbiomeMarker
  R package for microbiome biomarker discovery
  ☆183Updated 2 months ago
• wilkox / gggenes
  ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2
  ☆544Updated last week
• hbctraining / Training-modules
  Materials for short, half-day workshops
  ☆328Updated last month
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆190Updated last year