Alternatives and similar repositories for mixOmics

Users that are interested in mixOmics are comparing it to the libraries listed below

• noriakis / ggkegg
  Analyzing and visualizing KEGG information using the grammar of graphics
  ☆235Updated last month
• YuLab-SMU / enrichplot
  Visualization of Functional Enrichment Result
  ☆248Updated this week
• tidyomics / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆174Updated last week
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆121Updated 5 years ago
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆225Updated last year
• alserglab / fgsea
  Fast Gene Set Enrichment Analysis
  ☆423Updated last week
• kevinblighe / EnhancedVolcano
  Publication-ready volcano plots with enhanced colouring and labeling
  ☆439Updated last year
• cxli233 / SimpleTidy_GeneCoEx
  A simple gene co-expression analyses workflow powered by tidyverse and graph analyses
  ☆209Updated 2 months ago
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆198Updated last year
• YuLab-SMU / ChIPseeker
  ChIP peak Annotation, Comparison and Visualization
  ☆244Updated 2 weeks ago
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆268Updated 9 months ago
• Bioconductor / Contributions
  Contribute Packages to Bioconductor
  ☆143Updated 7 months ago
• Olink-Proteomics / OlinkRPackage
  Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users…
  ☆121Updated last week
• egeulgen / pathfindR
  pathfindR: Enrichment Analysis Utilizing Active Subnetworks
  ☆196Updated 2 months ago
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆166Updated 4 months ago
• iDEP-SDSU / idep
  Integrated Differential Expression and Pathway analysis
  ☆134Updated last week
• xia-lab / MetaboAnalystR
  R package for MetaboAnalyst
  ☆363Updated last week
• crazyhottommy / The-world-of-faculty
  resources for faculty
  ☆218Updated 2 years ago
• csoneson / ARMOR
  Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
  ☆165Updated last month
• funkyheatmap / funkyheatmap
  Visualising data frames as funky heatmaps 📊
  ☆188Updated 3 weeks ago
• OSCA-source / OSCA
  The package wrapping the book, for deployment via the Bioconductor build system.
  ☆95Updated last year
• jokergoo / InteractiveComplexHeatmap
  Make Interactive Complex Heatmaps
  ☆138Updated last year
• csbl-usp / CEMiTool
  Co-Expression Module Identification Tool (CEMiTool) official repository
  ☆22Updated last month
• bioFAM / MOFA2
  Multi-Omics Factor Analysis
  ☆358Updated last year
• ropensci / biomartr
  Genomic Data Retrieval with R
  ☆224Updated this week
• Lindseynicer / WGCNA_tutorial
  A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
  ☆72Updated 3 years ago
• bernatgel / karyoploteR
  karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
  ☆347Updated 5 months ago
• federicomarini / awesome-expression-browser
  😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
  ☆139Updated 3 weeks ago
• hbctraining / Training-modules
  Materials for short, half-day workshops
  ☆340Updated 2 months ago
• saezlab / decoupleR
  R package to infer biological activities from omics data using a collection of methods.
  ☆273Updated 8 months ago