Alternatives and similar repositories for fastqcr:

Users that are interested in fastqcr are comparing it to the libraries listed below

• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆111Updated last year
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆103Updated 3 years ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆90Updated 3 months ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆44Updated 3 months ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆37Updated 3 months ago
• pinin4fjords / shinyngs
  Shiny apps for NGS etc based on reusable components created using Shiny modules
  ☆75Updated 3 weeks ago
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆71Updated last week
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆143Updated 2 months ago
• Shians / Glimma
  Glimma R package
  ☆50Updated 5 months ago
• lvulliard / BioCircos.R
  Htmlwidgets binding R commands to the BioCircos.js library
  ☆37Updated 5 years ago
• joey711 / shiny-phyloseq
  An interactive web application for demonstrating and using phyloseq.
  ☆60Updated 5 years ago
• GMOD / JBrowseR
  R interface to the JBrowse 2 Linear Genome View.
  ☆35Updated 11 months ago
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated last month
• statdivlab / corncob
  Count Regression for Correlated Observations with the Beta-binomial
  ☆105Updated 5 months ago
• spholmes / F1000_workflow
  ☆43Updated 7 years ago
• microbiome / mia
  Microbiome analysis
  ☆52Updated this week
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆36Updated 6 years ago
• rnabioco / valr
  Genome Interval Arithmetic in R
  ☆90Updated last week
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated last month
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆68Updated 8 months ago
• XiaoLuo-boy / ggheatmap
  ggplot2 version of heatmap
  ☆87Updated last year
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• zhengxwen / SNPRelate
  R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)
  ☆104Updated 3 months ago
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆29Updated 7 months ago
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆22Updated 2 years ago
• rqtl / qtl2
  QTL analysis software for high-dimensional data and complex cross designs
  ☆34Updated 2 months ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆39Updated 11 months ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆60Updated last week
• brendankelly / micropower
  power estimation for microbiome studies analyzed with pairwise distances and PERMANOVA
  ☆35Updated 9 years ago