jsychong / MetaboAnalystR
☆10Updated 5 years ago
Alternatives and similar repositories for MetaboAnalystR:
Users that are interested in MetaboAnalystR are comparing it to the libraries listed below
- ☆13Updated 2 years ago
- METAgenomic LONgitudinal Differential Abundance method☆16Updated 5 years ago
- ☆16Updated this week
- ☆26Updated 2 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 5 years ago
- TOP results by CONfident efFECT Sizes.☆14Updated 4 months ago
- Methods used in the article "Assessment of statistical methods from single cell, bulk RNA-seq and metagenomics applied to microbiome data…☆10Updated 4 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆21Updated 2 months ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆15Updated 2 years ago
- Omics Data Analysis Tools☆11Updated 4 months ago
- Do microbiome analysis with dada2 and phyloseq object☆13Updated 6 months ago
- Molecular Signatures Database (MSigDB) in a data frame☆17Updated 6 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆18Updated 5 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated last year
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆23Updated last year
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated 3 months ago
- HOT regions paper☆11Updated 5 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated 3 months ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Code for EpiMap data browser☆14Updated 10 months ago
- Protocol of the analysis of iTRAQ/TMT proteomics data including quantification, statistical analysis and maybe clustering☆12Updated 5 years ago
- An automated pipe for reproducible RNA-seq analysis with the minimal efforts from researchers. You only need to provide the taxa name and…☆13Updated 3 years ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆22Updated 2 months ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- An integrated analysis toolkit and pipeline for Next-Generation Sequencing (NGS) panel sequencing data☆14Updated 6 years ago
- ☆32Updated last year
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- R statistical toolbox for metabolomics☆20Updated 6 months ago