davemcg / awesome_genome_browsers
☆10Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for awesome_genome_browsers
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated last year
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Updated last year
- TOP results by CONfident efFECT Sizes.☆14Updated last year
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated 8 months ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- An R package for multi-dimensional pathway enrichment analysis☆16Updated last week
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 5 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆28Updated 3 months ago
- Toolkit for QTL mapping and meta-analysis.☆16Updated 2 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆17Updated 5 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Updated 3 years ago
- A tidy interface for coverage analysis☆24Updated 4 years ago
- R interface to megadepth: BigWig and BAM related utilities☆11Updated 6 months ago
- interactive plots for differential expression analysis☆25Updated 2 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated last month
- Archived version of RUVSeq☆8Updated 7 years ago
- Genomic plot in trellis layout☆39Updated 8 months ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 6 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- R package to organise and standardise your genomic variant calls obtained with different callers.☆11Updated 5 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 4 years ago
- mitochondrial variant analysis tools☆13Updated 3 years ago
- iread☆23Updated 3 years ago
- R package to quickly obtain count vectors from indexed bam files☆13Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆19Updated 2 years ago