Alternatives and similar repositories for KSEA

Users that are interested in KSEA are comparing it to the libraries listed below

• liuhong-jia / scAnno
  ☆25Updated 4 months ago
• broadinstitute / protigy
  Proteomics Toolset for Integrative Data Analysis
  ☆25Updated last week
• pnnl / leapR
  ☆18Updated this week
• UCLouvain-CBIO / depmap
  Cancer Dependency Map package
  ☆30Updated last year
• ByrumLab / ProteoViz
  Interactive tool for Phosphoproteomics
  ☆13Updated 5 years ago
• kuijjerlab / retriever
  Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data
  ☆15Updated 3 years ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆22Updated 3 months ago
• CancerRxGene / gdscIC50
  An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.
  ☆28Updated 2 years ago
• rformassspectrometry / metaRbolomics-book
  The MetaRbolomics book. A review of R packages in BioC, CRAN, gitlab and github.
  ☆34Updated 4 years ago
• saezlab / cosmosR
  COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…
  ☆62Updated last week
• arnesmits / DEP
  DEP package
  ☆28Updated 3 years ago
• KatrionaGoldmann / volcano3D
  An R package to plot interactive three-way differential expression analysis
  ☆38Updated 2 years ago
• interactivereport / Quickomics
  Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.
  ☆42Updated last month
• kuppal2 / xMWAS
  ☆16Updated 4 months ago
• kenichi-shimada / shinyDepMap
  A shiny-based web tool for interactive analysis of DepMap data
  ☆24Updated 4 years ago
• UCLouvain-CBIO / scp
  Single cell proteomics data processing
  ☆29Updated this week
• tidymass / tidymass
  tidymass
  ☆58Updated 3 weeks ago
• pmartR / pmartR
  The pmartR R package provides functionality for quality control, normalization, exploratory data analysis, and statistical analysis of ma…
  ☆46Updated this week
• kenichi-shimada / depmap-analysis
  This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…
  ☆13Updated 4 years ago
• saezlab / MetaProViz
  R-package to perform metabolomics pre-processing, differential metabolite analysis, metabolite clustering and custom visualisations.
  ☆16Updated last week
• dbdimitrov / BingleSeq
  BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses
  ☆22Updated 4 years ago
• MASHUOA / HiTMaP
  An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics
  ☆18Updated 2 weeks ago
• ropensci / UCSCXenaTools
  An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.…
  ☆110Updated 2 weeks ago
• keyes-timothy / tidytof
  An R package for analyzing high-dimensional cytometry data using the tidyverse.
  ☆19Updated last year
• theislab / atlas-feature-selection-benchmark
  Code for "Feature selection methods affect the performance of scRNA-seq data integration and querying"
  ☆28Updated 7 months ago
• Vitek-Lab / MSstatsShiny
  R-Shiny GUI integrated with the MSstats package family
  ☆16Updated 2 weeks ago
• jaspershen / MetNormalizer
  MetNormalizer is used to normalize large scale metabolomics data.
  ☆22Updated 4 years ago
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 3 years ago
• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆47Updated 4 months ago
• singha53-zz / diablo
  DIABLO - an integrative multi-group, multi-dataset classification method
  ☆26Updated 6 years ago