Metagenomic AnalySis with QUantitative pipEline
☆12Apr 24, 2019Updated 6 years ago
Alternatives and similar repositories for masque
Users that are interested in masque are comparing it to the libraries listed below
Sorting:
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- SHAMAN is a SHiny application for Metagenomic ANalysis including a bioinformatic workflow, the statistical analysis and multiple visualiz…☆13Feb 5, 2025Updated last year
- Generating tool descriptors from bio.tools☆10Jun 13, 2018Updated 7 years ago
- Bioinformatics Pipeline☆12Oct 7, 2022Updated 3 years ago
- Tips and tricks for plotting in python☆28Nov 27, 2018Updated 7 years ago
- Miscellaneous scripts☆24Sep 7, 2016Updated 9 years ago
- RNA-seq, QC and differential analysis pipeline☆17Nov 25, 2025Updated 3 months ago
- Repository of the integrated mouse gut metagenomic catalog☆20Mar 14, 2022Updated 3 years ago
- Tools for extracting individual genomes from metagenomes☆16Dec 4, 2023Updated 2 years ago
- METAgenomic LONgitudinal Differential Abundance method☆16Dec 17, 2019Updated 6 years ago
- A continually expanding collection of microbiome analysis tools☆19Feb 24, 2022Updated 4 years ago
- Microbiome research☆21May 24, 2022Updated 3 years ago
- Strain Prediction and Analysis with Representative SEquence☆19Dec 8, 2024Updated last year
- tutorials for 2015 EDAMAME☆24Aug 9, 2017Updated 8 years ago
- Maximum Likelihood Amplicon Pipeline☆22May 22, 2024Updated last year
- Improvement of metagenome-assembled genomes☆55Mar 17, 2020Updated 5 years ago
- Python toolbox for multi-omics data mapping and analysis☆26Apr 13, 2023Updated 2 years ago
- Metagenomic species profiling with enhanced coverage of the human gut microbiome☆25May 18, 2024Updated last year
- Taxonomic classification of viruses at Order and Family level☆21Mar 1, 2023Updated 3 years ago
- Microbiome Analysis Using R Workshop originally organized for the 2018 ASM General Meeting in Atlanta, GA, but regularly updated since.☆27Aug 24, 2022Updated 3 years ago
- An R package for analysis of microbiome relative abundance data using zero inflated beta GAMLSS and meta-analysis across microbiome studi…☆34Nov 12, 2020Updated 5 years ago
- ☆10May 14, 2025Updated 9 months ago
- An image analysis tool for measuring microorganism colony growth☆12Dec 12, 2025Updated 2 months ago
- Tools for visualising microbial community amplicon data☆72Nov 3, 2025Updated 4 months ago
- ☆29Apr 18, 2023Updated 2 years ago
- The is mostly a wrapper tool using phyloseq and microbiome R packages.☆32Nov 23, 2022Updated 3 years ago
- Learning the basics of reading and writing files in Python.☆10Mar 16, 2021Updated 4 years ago
- Automated pipeline for amplicon sequence analysis☆11Nov 25, 2025Updated 3 months ago
- ☆10Jan 20, 2022Updated 4 years ago
- This is the website for the Language Technology and Data Analysis Laboratory (LADAL) which is part of the School of Languages and Culture…☆14Jan 29, 2025Updated last year
- Standardized and Automated MetaBarcoding Analyses workflow (Mirror)☆13Jun 28, 2023Updated 2 years ago
- Week 3 of the OSU CoMS Webinar: Introduction to Amplicon Sequencing (QIIME, DADA2, mothur) and Ecological Statistics☆10May 28, 2023Updated 2 years ago
- Tutorial for Metagenomics Analyses☆10Jun 16, 2020Updated 5 years ago
- This is the site where we store shared code for the Michigan Mycology Lab☆15Apr 10, 2024Updated last year
- ☆10Mar 24, 2025Updated 11 months ago
- USDA Nutrition codes Tree☆11Feb 13, 2020Updated 6 years ago
- Repository of common bioinformatics scripts☆39Sep 21, 2021Updated 4 years ago
- OLD repo for RLadies Sydney blog☆11Mar 24, 2025Updated 11 months ago
- An R package for annotation of circular RNAs☆11Mar 30, 2020Updated 5 years ago