An S3 data object and framework for common quantitative proteomic analyses
☆47Oct 13, 2026Updated this week
Alternatives and similar repositories for tidyproteomics
Users that are interested in tidyproteomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Differential Expression Analysis tool box R lang package for omics data☆48Oct 9, 2026Updated last week
- An r package for proteomics data Analysis, developed from DEP.☆39Mar 21, 2025Updated last year
- Create .mzML files through the R Console☆12Jun 14, 2026Updated 4 months ago
- R package - MSstats☆102Oct 4, 2026Updated last week
- Analysis and visualization of RNA-Seq results☆34Aug 25, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- MSConnect is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.☆20Aug 19, 2025Updated last year
- ☆12Jan 14, 2023Updated 3 years ago
- ☆17Updated this week
- A comprehensive R package for label-free proteomics data analysis and modeling☆16May 7, 2026Updated 5 months ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Apr 16, 2019Updated 7 years ago
- ☆13Sep 30, 2024Updated 2 years ago
- Data Processing Kitchen Sink for proteomics data☆16Jun 15, 2026Updated 4 months ago
- quantms workflow for DIANN tool including DIA and DDA analysis☆19Oct 8, 2026Updated last week
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Snakemake pipeline for running MAJIQ☆23Dec 20, 2023Updated 2 years ago
- METAgenomic LONgitudinal Differential Abundance method☆15Dec 17, 2019Updated 6 years ago
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆52Aug 12, 2025Updated last year
- ☆18Sep 16, 2023Updated 3 years ago
- ☆15Nov 2, 2017Updated 8 years ago
- Genoppi: an open-source software for robust and standardized integration of proteomic and genetic data☆26May 15, 2024Updated 2 years ago
- An R package for correcting p-values for multiple hypothesis testing in comparative quantitative omics experiments using permutation-base…☆13Mar 11, 2026Updated 7 months ago
- ☆12May 26, 2020Updated 6 years ago
- Coefficient of Variation (CV) and Coefficient of Quartile Variation (CQV) with Confidence Intervals (CI)☆10Sep 1, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- ☆13Nov 26, 2024Updated last year
- ☆17Sep 13, 2024Updated 2 years ago
- ☆17Oct 3, 2023Updated 3 years ago
- Interactive tool for Phosphoproteomics☆15May 6, 2020Updated 6 years ago
- A unifying bioinformatics framework for organelle proteomics☆16Apr 22, 2026Updated 5 months ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆106Jul 23, 2026Updated 2 months ago
- StatsPro : systematic integration and evaluation of statistical approaches for detecting differential expression in label-free quantitat…☆13Mar 13, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Development repository for the Bioconductor package 'mixOmics '☆269Oct 2, 2026Updated 2 weeks ago
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆11Jul 13, 2018Updated 8 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Mar 7, 2022Updated 4 years ago
- InstaPrism is an R package for fast implementation of BayesPrism☆62Jun 3, 2024Updated 2 years ago
- Multi-Enrichment Analysis of Gene Set Enrichment Analysis Results☆27Oct 7, 2026Updated last week
- ☆35Jan 26, 2022Updated 4 years ago