jeffsocal / tidyproteomicsView external linksLinks
An S3 data object and framework for common quantitative proteomic analyses
☆47Dec 15, 2025Updated last month
Alternatives and similar repositories for tidyproteomics
Users that are interested in tidyproteomics are comparing it to the libraries listed below
Sorting:
- Differential Expression Analysis tool box R lang package for omics data☆47Dec 19, 2025Updated last month
- a deep generative model for single-cell survival analysis☆16Dec 2, 2025Updated 2 months ago
- A comprehensive R package for label-free proteomics data analysis and modeling☆16Nov 15, 2025Updated 2 months ago
- Analysis and visualization of RNA-Seq results☆30Dec 31, 2025Updated last month
- ☆16Sep 13, 2024Updated last year
- An r package for proteomics data Analysis, developed from DEP.☆34Mar 21, 2025Updated 10 months ago
- METAgenomic LONgitudinal Differential Abundance method☆16Dec 17, 2019Updated 6 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Apr 16, 2019Updated 6 years ago
- R package - MSstats☆90Jan 29, 2026Updated 2 weeks ago
- Multi-Enrichment Analysis of Gene Set Enrichment Analysis Results☆26Feb 4, 2026Updated last week
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- ☆23May 16, 2020Updated 5 years ago
- Data Processing Kitchen Sink for proteomics data☆13Jan 13, 2026Updated last month
- The OSDF JSON-Schema files for the HMP project☆14Aug 26, 2021Updated 4 years ago
- Assembly and Annotation of the Human Immune Health Atlas☆20Aug 28, 2025Updated 5 months ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 4 years ago
- "Dissecting cell-type composition and activity-dependent transcriptional state in mammalian brains by massively parallel single-nucleus R…☆13Jan 7, 2018Updated 8 years ago
- Interactive tool for Phosphoproteomics☆13May 6, 2020Updated 5 years ago
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Temporal Development of the Gut Microbiome in Early Childhood - The TEDDY Study☆10Jul 13, 2018Updated 7 years ago
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆51Aug 12, 2025Updated 6 months ago
- Supervised cell type identification for scATAC-seq data☆14Aug 23, 2023Updated 2 years ago
- deconvolution for RNAseq and bisulfite sequencing☆11Aug 17, 2020Updated 5 years ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆13Dec 13, 2024Updated last year
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- ☆13Nov 2, 2017Updated 8 years ago
- ☆12Jan 14, 2023Updated 3 years ago
- HPC pipeline for overlapping V4 16S rRNA reads generated on Illumina MiSeq☆11Sep 1, 2015Updated 10 years ago
- ☆12Sep 29, 2023Updated 2 years ago
- ☆13Jul 11, 2024Updated last year
- BioCarta pathway images☆11Jan 30, 2026Updated 2 weeks ago
- Create .mzML files through the R Console☆12Aug 27, 2025Updated 5 months ago
- Initial recommendations for performing, benchmarking, and reporting single-cell proteomics experiments. The code is distributed under an …☆12Apr 5, 2023Updated 2 years ago
- ☆12May 26, 2020Updated 5 years ago
- Co-occurrence analysis in pubmed and faers of two lists of terms.☆17Mar 8, 2025Updated 11 months ago
- metaX: a flexible and comprehensive software for processing omics data.☆26Jun 16, 2023Updated 2 years ago
- A tissue-specific single-cell biological age model☆13Jul 26, 2023Updated 2 years ago
- ☆13Sep 30, 2024Updated last year
- ☆68May 7, 2024Updated last year