☆30Jul 10, 2025Updated 7 months ago
Alternatives and similar repositories for PhenotypeSimulator
Users that are interested in PhenotypeSimulator are comparing it to the libraries listed below
Sorting:
- An R package to compute relationship matrices for diploid and autotetraploid species☆22Dec 12, 2025Updated 2 months ago
- A pipeline that takes clinical notes from EHRs and generate phenotype terms, then generate ranked gene list☆37Jul 25, 2023Updated 2 years ago
- Simulation of rare and common variants based on 1000 genomes data☆19Sep 24, 2021Updated 4 years ago
- GridLMM package☆39Oct 16, 2025Updated 4 months ago
- detectRuns: a R Package for Runs of Homozygosity and Runs of Heterozygosity☆12May 25, 2023Updated 2 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 2 months ago
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated last year
- Atwell et al data☆11Jan 16, 2019Updated 7 years ago
- Calculate AUC based on GWAS summary statistics only☆10Jun 29, 2018Updated 7 years ago
- Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data☆23Apr 11, 2019Updated 6 years ago
- A small C and Python library for reading PLINK genotype files.☆51Nov 27, 2024Updated last year
- Effective Computing—Resources for Computational Biologists☆27Apr 17, 2020Updated 5 years ago
- ☆114Oct 3, 2025Updated 5 months ago
- Breast cancer risk prediction using genotyped data☆12Oct 11, 2018Updated 7 years ago
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆12Sep 25, 2017Updated 8 years ago
- A fast and robust Bayesian nonparametric method for prediction of complex traits using GWAS summary statistics☆13May 24, 2025Updated 9 months ago
- Specification for the GWAS-VCF format (manuscript in preparation)☆26Aug 3, 2021Updated 4 years ago
- Encore Analysis Server☆13Nov 18, 2025Updated 3 months ago
- The main website for the OpenMendel project.☆13Jul 24, 2022Updated 3 years ago
- materials and website for the 2016 kallisto sleuth workshop☆11Nov 7, 2016Updated 9 years ago
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Oct 5, 2021Updated 4 years ago
- ☆13Mar 28, 2021Updated 4 years ago
- ☆191Jun 20, 2023Updated 2 years ago
- Evolutionary Bioinformatics Toolkit (EBT)☆12Jul 14, 2020Updated 5 years ago
- A rapido and lightweight method for PGS computation☆14Feb 19, 2025Updated last year
- Library and command line scripts for fitting heteroskedastic linear mixed models to genetic data. Can be used to perform GWAS for genetic…☆18Sep 13, 2018Updated 7 years ago
- Data exploration with multiple machine learning algorithms☆14Nov 28, 2021Updated 4 years ago
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 8 years ago
- ☆18Oct 4, 2023Updated 2 years ago
- PRS pipeline using PRS_CS☆15Oct 21, 2025Updated 4 months ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Apr 29, 2021Updated 4 years ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆15Aug 11, 2023Updated 2 years ago
- A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.☆16Jul 7, 2022Updated 3 years ago
- Pairwise Hierarchical Model☆20Mar 11, 2022Updated 3 years ago
- Code and simulations using biologically annotated neural networks☆23Aug 23, 2021Updated 4 years ago
- Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny☆20Jan 15, 2020Updated 6 years ago
- PHOENIX: a tool to infer biologically informed NeuralODEs describing genome-wide regulatory dynamics☆19May 8, 2024Updated last year
- ☆16Oct 16, 2017Updated 8 years ago
- ☆24Feb 23, 2026Updated last week