chasewnelson / EBTLinks
Evolutionary Bioinformatics Toolkit (EBT)
☆12Updated 5 years ago
Alternatives and similar repositories for EBT
Users that are interested in EBT are comparing it to the libraries listed below
Sorting:
- De novo annotation of young retrotransposons☆47Updated 3 years ago
- An efficient way to convert gff3 annotation files into EMBL format ready to submit.☆66Updated 6 months ago
- Improved Phased Assembler☆28Updated 3 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- Dot: An interactive dot plot viewer for comparative genomics☆35Updated 2 years ago
- GAPPadder is tool for closing gaps on draft genomes with short sequencing data☆28Updated 8 years ago
- A tool for discovering transposable elements and describing patterns of genome evolution☆31Updated 2 years ago
- Visualize whole genome alignments as linear maps☆74Updated 3 weeks ago
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- ☆26Updated 6 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Updated 6 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 5 years ago
- catalog for long-read sequencing tools☆32Updated 2 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 4 months ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated last year
- HyPo: Super Fast & Accurate Polisher for Long Read Genome Assemblies☆64Updated 5 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆25Updated 5 years ago
- ☆28Updated 3 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆39Updated 2 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 7 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆67Updated 3 years ago
- ☆35Updated 5 years ago
- Correcting errors in noisy long reads using variation graphs☆50Updated 3 years ago
- viralComplete: BLAST-based viral completeness verification☆24Updated 4 years ago
- a long-read error correction tool using the multi-string Burrows Wheeler Transform☆45Updated 5 years ago
- Within-species genome-wide dN/dS estimation from very many genomes☆23Updated 5 years ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆33Updated 3 years ago
- Mapping-based Genome Size Estimation (MGSE) performs an estimation of a genome size based on a read mapping to an existing genome sequenc…☆37Updated 7 months ago