WilsonSayresLab / XYalignLinks
Identifying, understanding, and correcting technical biases on the sex chromosomes in next-generation sequencing data
☆23Updated 6 years ago
Alternatives and similar repositories for XYalign
Users that are interested in XYalign are comparing it to the libraries listed below
Sorting:
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆23Updated 6 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- ☆29Updated 6 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Updated 3 years ago
- Population-based detection of structural variation from High-Throughput Sequencing.☆33Updated 3 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated 2 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Updated 4 years ago
- The Genome U-Plot is a JavaScript tool to visualize chromosomal abnormalities in the Human Genome using a U-shape layout.☆32Updated 3 years ago
- Reducing reference bias using multiple population reference genomes☆34Updated last year
- FermiKit small variant calls for public SGDP samples☆17Updated 9 years ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆36Updated 2 years ago
- PopSTR - A Population based microsatellite genotyper☆32Updated 2 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 months ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Updated 9 years ago
- v2.x of the microassembly based somatic variant caller☆23Updated 6 months ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Personal diploid genome creation and coordinate conversion☆30Updated 9 months ago
- Python package and routines for merging VCF files