deruncie / GridLMM
GridLMM package
☆40Updated last year
Related projects: ⓘ
- R package for fitting high-dimensional multivariate linear mixed effect models☆35Updated this week
- Mixed models @lme4 + custom covariances + parameter constraints☆48Updated 3 years ago
- Sample code for ldsc analyses in UKBB☆28Updated last year
- A matrix-like wrapper around PLINK .bed files☆18Updated last week
- An R package for multivariate adaptive shrinkage.☆88Updated 11 months ago
- Learn and validate subtypes from multiple traits☆20Updated 3 years ago
- Effective Computing—Resources for Computational Biologists☆23Updated 4 years ago
- A Suite of Packages for Analysis of Big Genomic Data☆34Updated 11 months ago
- Statistical GENetics Input/Output Functions☆17Updated 3 weeks ago
- R package to estimate kinship and FST from SNP data☆19Updated last year
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Updated 4 years ago
- An R package for adaptive shrinkage☆79Updated 4 months ago
- Generalized linear Mixed Model Association Tests☆36Updated 10 months ago
- Bayesian hierarchical model for complex trait analysis☆45Updated 7 months ago
- R package to model and simulate admixed populations☆8Updated last year
- Materials for Module 2 of the SISBID Workshop, Visualization of Biomedical Big Data☆25Updated 7 years ago
- ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium☆11Updated 3 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 7 months ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆32Updated 6 years ago
- Quantitative Trait Cluster Association Test in R☆25Updated 3 years ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆37Updated 11 months ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆50Updated last year
- Various Ideas for Confounder Adjustment in Regression☆23Updated last year
- fastqcr: Quality Control of Sequencing Data☆67Updated last year
- snpnet: Fast and scalable lasso/elastic-net solver for large SNP data☆32Updated 3 months ago
- Implemention of Accurate estimation of SNP-heritability from biobank-scale data irrespective of genetic architecture. (Nature Genetics 20…☆14Updated 5 years ago
- Glimma R package☆50Updated 2 weeks ago
- Toy simulations and analyses of heritability and genetic differences☆10Updated 2 months ago
- A new model and algorithm for multivariate Bayesian variable selection regression.☆21Updated 4 months ago
- QTL analysis software for high-dimensional data and complex cross designs☆34Updated 3 weeks ago