Encore Analysis Server
☆13Nov 18, 2025Updated 3 months ago
Alternatives and similar repositories for encore
Users that are interested in encore are comparing it to the libraries listed below
Sorting:
- Interface to various variant calling formats.☆31Jun 15, 2024Updated last year
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated last year
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 2 years ago
- A fast and robust Bayesian nonparametric method for prediction of complex traits using GWAS summary statistics☆13May 24, 2025Updated 9 months ago
- Applying polygenic scores (PGS) on imputed genotypes☆31Oct 28, 2025Updated 4 months ago
- The main website for the OpenMendel project.☆13Jul 24, 2022Updated 3 years ago
- Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)☆33Feb 10, 2026Updated 2 weeks ago
- A rapido and lightweight method for PGS computation☆14Feb 19, 2025Updated last year
- A tool to build a website to browse hundreds or thousands of GWAS.☆191Sep 11, 2025Updated 5 months ago
- Minimac3 is a low memory and computationally efficient implementation of the genotype imputation algorithms. Minimac3 is designed to hand…☆30Mar 28, 2022Updated 3 years ago
- Simple matching of HTS samples based on HLA typing☆14Jan 4, 2017Updated 9 years ago
- ☆196May 2, 2022Updated 3 years ago
- Code for performing PCA followed by CCA☆18Dec 2, 2018Updated 7 years ago
- Generate and process BAM files from Illumina sequencing instrument files☆23Feb 25, 2016Updated 10 years ago
- PGxPOP☆17Jan 25, 2023Updated 3 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆18Apr 2, 2020Updated 5 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Jun 15, 2021Updated 4 years ago
- SEQSpark documentation☆18Nov 17, 2020Updated 5 years ago
- use the noise☆15Apr 15, 2020Updated 5 years ago
- Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves u…☆84Sep 28, 2024Updated last year
- Scripts for implementing the Tractor pipeline☆53Sep 4, 2025Updated 5 months ago
- Load genomic BAM files using Apache Spark☆21Jun 17, 2018Updated 7 years ago
- ☆24Feb 24, 2025Updated last year
- R package for adaptive correlation and covariance matrix shrinkage.☆23Jan 23, 2019Updated 7 years ago
- Evaluation of phasing performance☆23Mar 6, 2018Updated 7 years ago
- OpenMendel package for haplotyping and imputation☆25Oct 8, 2025Updated 4 months ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Jul 13, 2018Updated 7 years ago
- Specification for the GWAS-VCF format (manuscript in preparation)☆26Aug 3, 2021Updated 4 years ago
- Ultra Fast NGS Data QC Tool☆28Feb 14, 2021Updated 5 years ago
- Super high performance interactive heatmap software☆31Nov 19, 2018Updated 7 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆79Oct 7, 2025Updated 4 months ago
- ☆30Jul 10, 2025Updated 7 months ago
- gnomAD browser pre-ASHG 2018☆33Nov 2, 2020Updated 5 years ago
- Haplotype phasing software☆69Dec 5, 2020Updated 5 years ago
- Toil workflows for common genomic pipelines☆33Oct 3, 2019Updated 6 years ago
- Clonal reconstruction from HTS data☆10Oct 27, 2021Updated 4 years ago
- A utility for merging and genotyping Illumina-style GVCFs.☆33Feb 26, 2019Updated 7 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33May 15, 2019Updated 6 years ago
- mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data☆40Sep 8, 2025Updated 5 months ago