statgen / encoreLinks
Encore Analysis Server
☆13Updated 2 months ago
Alternatives and similar repositories for encore
Users that are interested in encore are comparing it to the libraries listed below
Sorting:
- Building the constrained coding regions (CCR) model☆16Updated 6 years ago
- Interface to various variant calling formats.☆30Updated last year
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- SEQSpark documentation☆18Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 11 months ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 2 months ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- Finding cryptic relationships to boost disease gene detection☆12Updated 2 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- ☆29Updated 4 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Updated 7 years ago
- highly-efficient & lightweight mutation signature matrix aggregation☆18Updated 3 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- Easily run WDL workflows on GCP☆13Updated 3 years ago
- Quality control on genetic variants from next-generation sequencing data using random forest☆21Updated 3 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Numerical Encoding for Human Genetic Variants☆41Updated 2 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- Causal Variant Evidence Mapping with Non-parametric resampling☆12Updated 4 years ago
- Allele-Specific Quantification of Structural Variations in Cancer Genomes☆18Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- ☆21Updated 3 years ago
- Opossum is a tool to pre-process RNA-seq reads prior to variant calling.☆28Updated 7 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- snp.plotter is an R package that creates publishable-quality plots of p-values using single SNP and/or haplotype data.☆19Updated last year