A flexible tool for the multi-resolution localization of causal variants across the genome, accounting for population structure.
☆16Jul 7, 2022Updated 4 years ago
Alternatives and similar repositories for knockoffgwas
Users that are interested in knockoffgwas are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package to estimate kinship and FST from SNP data☆21Jan 27, 2026Updated 5 months ago
- Fast EM algorithm for a Probabilistic PCA model for Genotype data☆21Jan 14, 2022Updated 4 years ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- This is the GPress, a framework for querying GTF, GFF3 and expression files in a compressed form.☆11Oct 5, 2023Updated 2 years ago
- population genetic simulations with R and Shiny☆28Nov 3, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 8 years ago
- Faster multispecies coalescent inference using multilocus data☆15Aug 13, 2023Updated 2 years ago
- ☆19May 15, 2025Updated last year
- CoalHMM☆22Nov 4, 2013Updated 12 years ago
- Stratified squared trans-ethnic genetic correlation☆14May 12, 2022Updated 4 years ago
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.☆13Mar 5, 2021Updated 5 years ago
- AncestralPaths is a local ancestry painting technique based on genealogies produced by RELATE. The method aims to assign 'path' ancestrie…☆11Jun 29, 2023Updated 3 years ago
- ☆13Aug 18, 2023Updated 2 years ago
- PopSTR - A Population based microsatellite genotyper☆32Oct 23, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PSMC-based Migration and Split Time Inference (MiSTI) from two genomes☆12Mar 20, 2026Updated 3 months ago
- ☆15Jul 17, 2019Updated 6 years ago
- ☆12Aug 3, 2025Updated 11 months ago
- Identification of differentially methylated genes in biomedical data☆15Jan 26, 2026Updated 5 months ago
- feature-based deep learning for the identification of selective sweeps☆59Mar 31, 2026Updated 3 months ago
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- Recombination Landscape Estimation using Recurrent Neural Networks☆69Mar 27, 2026Updated 3 months ago
- A comprehensive pipeline to analyze and visualize structural variants☆20Jan 28, 2020Updated 6 years ago
- A versatile interface to the knockoff methodology.☆26Apr 1, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Estimate linkage disequilibrium between unphased loci☆11Jun 9, 2015Updated 11 years ago
- Time-stratified f-statistics☆17Aug 1, 2025Updated 11 months ago
- Reduction of Althaps and Duplicate Contigs for Improved Downstream Analysis☆21Jun 28, 2026Updated last week
- ☆10Feb 23, 2024Updated 2 years ago
- TESS3 is a fast and efficient program for estimating spatial population structure based on geographically constrained non-negative matrix…☆24Jun 21, 2023Updated 3 years ago
- Calculate indel trajectory likelihoods using methods of Miklós, Lunter & Holmes (2004), De Maio (2020), and Holmes (2020)☆14Sep 17, 2022Updated 3 years ago
- Genome-wide association studies (GWAS) for ordered categorical phenotypes☆23Updated this week
- Automated and Distributed Population Genetic Model Inference from Allele Frequency Spectra☆18Mar 31, 2026Updated 3 months ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Sep 19, 2020Updated 5 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Dec 11, 2019Updated 6 years ago
- ☆14Mar 7, 2021Updated 5 years ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆49Apr 20, 2026Updated 2 months ago
- A tool to construct repeats directly from raw reads☆17May 29, 2021Updated 5 years ago
- ☆32Jul 10, 2025Updated 11 months ago
- Infer demographic history with the Moran model☆51Jun 14, 2025Updated last year
- The GitHub for CLUES2, a method for inferring and evaluating evidence for selection.☆21Apr 9, 2025Updated last year