lsncibb / SummaryAUC
Calculate AUC based on GWAS summary statistics only
☆10Updated 6 years ago
Alternatives and similar repositories for SummaryAUC
Users that are interested in SummaryAUC are comparing it to the libraries listed below
Sorting:
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆19Updated 3 years ago
- genetic correlation between phenotypes in the UK biobank☆12Updated last year
- Sample code for ldsc analyses in UKBB☆30Updated 2 years ago
- An R package for generating comparative regional association plots☆18Updated 4 months ago
- Learn and validate subtypes from multiple traits☆20Updated 3 years ago
- ☆11Updated 2 years ago
- ☆10Updated 2 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆9Updated last year
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆12Updated 6 years ago
- PRS pipeline using PRS_CS☆14Updated 3 months ago
- GENetic Effect-Size distribution Inference from Summary-level data☆14Updated 4 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆21Updated 4 years ago
- Heritability, genetic correlation and functional enrichment estimation for case-control studies☆19Updated last year
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Updated 4 years ago
- HGNC Comparison of Orthology Predictions (HCOP)☆14Updated 7 years ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 11 months ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Updated 2 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 7 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 2 weeks ago
- A Grammar of Data Manipulation for Omics Data☆21Updated 4 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 2 years ago
- Primo☆16Updated 3 years ago
- Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).☆13Updated 2 years ago
- BioC2020: Where Software and Biology Connect☆12Updated 2 years ago
- An interactive graphical illustration of genetic associations and their biological context☆16Updated last year
- Genetics ToolboX R package☆31Updated 5 years ago
- ☆18Updated 7 years ago
- A rapido and lightweight method for PGS computation☆14Updated 3 months ago