eldronzhou / SDPRLinks
A fast and robust Bayesian nonparametric method for prediction of complex traits using GWAS summary statistics
☆13Updated 7 months ago
Alternatives and similar repositories for SDPR
Users that are interested in SDPR are comparing it to the libraries listed below
Sorting:
- Software to help identify overlap between association scan results and GWAS hit catalogs.☆15Updated 3 years ago
- A rapido and lightweight method for PGS computation☆14Updated 10 months ago
- ☆30Updated 5 months ago
- software package for integrative genetic association analysis☆35Updated 2 years ago
- Repository for resources we'd like to share with the community.☆25Updated 3 years ago
- GWAS gold standards repository☆39Updated 2 years ago
- Prioritization of functional rare genetic variants by integrating genomic annotations and RNA-seq☆19Updated 3 years ago
- Suite of heritability and genetic correlation estimation tools for exome-sequencing data☆35Updated 3 weeks ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated 2 months ago
- Using k-mers to call HLA alleles in RNA sequencing data☆23Updated 7 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 2 months ago
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- ☆16Updated 8 years ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆21Updated 6 years ago
- ☆48Updated 5 months ago
- VETA - A simple tool do evaluate variant predictors☆11Updated last year
- Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.☆16Updated 11 years ago
- Differential ATAC-seq toolkit☆27Updated 2 years ago
- Signed LD profile regression code☆19Updated 4 months ago
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆44Updated 3 years ago
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated 3 weeks ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 7 years ago
- Paired Genomic Loci Tool Suite☆34Updated 3 years ago
- ☆13Updated 2 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆24Updated 11 months ago
- ☆16Updated 2 years ago
- Code and simulations using biologically annotated neural networks☆21Updated 4 years ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago