FINNGEN / CS-PRS-pipelineLinks
PRS pipeline using PRS_CS
☆14Updated 4 months ago
Alternatives and similar repositories for CS-PRS-pipeline
Users that are interested in CS-PRS-pipeline are comparing it to the libraries listed below
Sorting:
- Data and code for the Effector index☆13Updated 4 years ago
- ☆25Updated last week
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 7 months ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- Statistical fine-mapping pipeline in FinnGen☆30Updated this week
- ☆21Updated 3 years ago
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆20Updated 4 years ago
- Sample code for ldsc analyses in UKBB☆31Updated 2 years ago
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆15Updated last year
- ☆17Updated last month
- ☆34Updated last year
- causal TWAS (cTWAS)☆46Updated 2 weeks ago
- Phenome Exome Association and Correlation Of Key phenotypes☆27Updated 4 years ago
- ☆35Updated 2 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Updated 4 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆33Updated 5 years ago
- ☆50Updated this week
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆13Updated last year
- GWAS gold standards repository☆38Updated last year
- RSparsePro for robust fine-mapping in the presence of LD mismatch☆12Updated 11 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆36Updated last year
- A rapido and lightweight method for PGS computation☆14Updated 7 months ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Updated 2 years ago
- Genotype-based Prediction (GenoPred)☆74Updated this week
- Mediated Expression Score Regression (MESC)☆26Updated 3 years ago
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated 5 months ago
- RaMWAS: Fast Methylome-Wide Association Study Pipeline for Enrichment Platforms☆10Updated 4 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 8 months ago
- ☆18Updated 7 years ago