FINNGEN / CS-PRS-pipeline
PRS pipeline using PRS_CS
☆12Updated 8 months ago
Related projects ⓘ
Alternatives and complementary repositories for CS-PRS-pipeline
- ☆18Updated 2 years ago
- Data and code for the Effector index☆13Updated 4 years ago
- Statistical fine-mapping pipeline in FinnGen☆26Updated 3 weeks ago
- GWAS genetics Fine-mapping method☆16Updated 3 weeks ago
- ☆18Updated 6 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆38Updated last month
- Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337☆17Updated 2 months ago
- ☆11Updated 2 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- ☆32Updated last year
- metaUSAT is a data-adaptive statistical approach for testing genetic associations of multiple traits from single/multiple studies using u…☆18Updated 3 years ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆12Updated 9 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆24Updated 6 months ago
- Code for creating cell-type-specific regulatory element annotation files☆18Updated 5 months ago
- ☆18Updated last year
- ☆13Updated last year
- ☆23Updated 4 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- genetic correlation between phenotypes in the UK biobank☆13Updated 8 months ago
- ☆20Updated this week
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- RSS-NET: Regression with Summary Statistics exploiting Network Topology☆18Updated last month
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆22Updated 4 years ago
- ☆19Updated last year
- Code for implementing Mendelian randomization investigations☆15Updated 9 years ago
- ☆11Updated last year
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆39Updated 6 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆12Updated last month
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆11Updated 5 years ago