adimitromanolakis / sim1000GLinks
Simulation of rare and common variants based on 1000 genomes data
☆19Updated 4 years ago
Alternatives and similar repositories for sim1000G
Users that are interested in sim1000G are comparing it to the libraries listed below
Sorting:
- Lollipop-diagram to interactively visualize genetic mutations☆33Updated last year
- highly-efficient & lightweight mutation signature matrix aggregation☆19Updated 3 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated 2 months ago
- Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)☆46Updated last month
- gnomAD browser pre-ASHG 2018☆33Updated 5 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Updated 7 years ago
- LDlink is a suite of web-based applications designed to easily and efficiently interrogate linkage disequilibrium in population groups. E…☆24Updated last week
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆62Updated 7 months ago
- R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…☆14Updated last year
- ☆16Updated 8 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- Allele frequency filter app☆14Updated 3 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated last month
- Code to reproduce analyses from the sleuth paper☆16Updated 7 years ago
- Transcript quantification import with automatic metadata detection☆67Updated this week
- TOPMed analysis pipeline☆52Updated 2 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Calculate and plot distributions of genomic ranges☆27Updated 7 months ago
- DriverPower☆26Updated 10 months ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 7 months ago
- Glimma R package☆50Updated last year
- a set of NGS pipelines☆24Updated 2 weeks ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- DRAGEN Tumor/Normal workflow post-processing☆24Updated 2 years ago