adimitromanolakis / sim1000GLinks
Simulation of rare and common variants based on 1000 genomes data
☆19Updated 3 years ago
Alternatives and similar repositories for sim1000G
Users that are interested in sim1000G are comparing it to the libraries listed below
Sorting:
- LDlink is a suite of web-based applications designed to easily and efficiently interrogate linkage disequilibrium in population groups. E…☆24Updated this week
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Updated 7 years ago
- Lollipop-diagram to interactively visualize genetic mutations☆33Updated last year
- Glimma R package☆50Updated last year
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- Transcript quantification import with automatic metadata detection☆67Updated this week
- Examples of kallisto + sleuth☆11Updated 8 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆31Updated 11 months ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 3 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- ☆16Updated 7 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- Tools for visualizing genomics data☆69Updated 3 years ago
- Allele frequency filter app☆14Updated 3 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 4 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆43Updated 2 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- Representation and manipulation of genomic intervals☆46Updated this week
- DriverPower☆26Updated 8 months ago
- Get SNP proxies from the 1000 Genomes Project.☆30Updated 6 years ago
- R-Based API for accessing the MSKCC Cancer Genomics Data Server (CGDS)☆25Updated 4 years ago
- Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)☆46Updated this week
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 8 months ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago