hakha-most / gwas_eqtl
☆16Updated last year
Related projects ⓘ
Alternatives and complementary repositories for gwas_eqtl
- ☆17Updated last week
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆11Updated 5 years ago
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆12Updated 2 years ago
- Fine-mapping with infinitesimal effects☆14Updated 7 months ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- Integration of TWAS and Colocalization Analysis☆13Updated last week
- ☆10Updated last year
- Create Regional Association Plots☆10Updated 3 months ago
- R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"☆10Updated 3 months ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆16Updated 2 years ago
- Identify Intra-, Inter-donor variations in bulk or single cell longitudinal dataset☆17Updated last year
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆20Updated last year
- Pairwise Hierarchical Model☆13Updated 2 years ago
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 5 years ago
- Multi-Omic Strategies for TWAS☆12Updated last year
- ☆14Updated 2 years ago
- An R package for generating comparative regional association plots☆18Updated 4 years ago
- Software to infer latent pleiotropic components from GWAS summary data☆12Updated last month
- PredictDB Pipeline for GTEx v7 data☆18Updated 2 years ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆10Updated 4 months ago
- single cell and bulk RNASeq analysis scripts☆12Updated 2 years ago
- Estimate genetic correlation using predicted expression☆19Updated 6 years ago
- ☆10Updated 2 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆16Updated this week
- GWAS genetics Fine-mapping method☆16Updated 3 weeks ago
- Workflow for performing cistrome-wide associations studies☆10Updated 2 years ago
- GENI plots to visualise results from genome-wide association studies☆21Updated 3 weeks ago
- Fine-mapping method only using summary statistics☆15Updated 8 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Updated 4 years ago
- ☆19Updated last month