pseudonymcp / keggmapping
Annotate sequences from BLAST against KEGG DB with KO numbers and summarize them in KEGG modules.
☆22Updated 6 years ago
Alternatives and similar repositories for keggmapping
Users that are interested in keggmapping are comparing it to the libraries listed below
Sorting:
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Updated 2 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- Assembling the cause of phenotypes and genotypes from NGS data☆29Updated 4 years ago
- Set of utilities on sequences and BAM files☆27Updated 3 years ago
- MetaCompass: Reference-guided Assembly of Metagenomes☆38Updated 4 years ago
- Phasing for metagenomics using PacBio long reads☆17Updated 3 years ago
- Extract metagenome-assembled genomes (MAGs) from metagenomic data using Hi-C.☆23Updated last month
- Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database☆41Updated 4 years ago
- mBin: a methylation-based binning framework for metagenomic SMRT sequencing reads☆25Updated 2 years ago
- Phylogeny Enhanded Prediction of PAN-genome☆40Updated 4 years ago
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- Convert genbank files to a swath of other formats☆18Updated last year
- ☆32Updated last year
- Strain Resolution ON Graphs☆47Updated last year
- OPAL: Open-community Profiling Assessment tooL☆28Updated 4 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Find Unique genomic Regions☆29Updated last month
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆28Updated 3 months ago
- viralComplete: BLAST-based viral completeness verification☆25Updated 3 years ago
- SpydrPick: mutual information based detection of pairs of genomic loci co-evolving under a shared selective pressure.☆13Updated 3 years ago
- Gene-flank analysis tool☆27Updated 4 months ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆37Updated 4 months ago
- A pipeline for high-quality bacterial genome construction using ONT sequencing☆39Updated 2 years ago
- tools for assessing the accuracy of genome assemblies☆34Updated last year
- A repository for the lessons and notebooks used for Binder tutorials☆13Updated 4 years ago
- 🔬🐛 Rapid 16s rRNA identification from isolate FASTQ files☆24Updated 7 years ago
- ☆22Updated 5 years ago
- Pangenome analysis of eukaryotes.☆18Updated 4 years ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆33Updated last year
- Trimming tool for Oxford Nanopore sequence data☆21Updated 3 years ago