Python package for building and analyzing models using ModelSEED
☆27Feb 11, 2026Updated 2 months ago
Alternatives and similar repositories for ModelSEEDpy
Users that are interested in ModelSEEDpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An integrated visual environment for metabolic modeling methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as…☆65Apr 2, 2026Updated 3 weeks ago
- CobraMod is a Python 3 open-source package which enables modifying and extending genome-scale metabolic models with metabolic pathway inf…☆17Updated this week
- Python interface for running COMETS simulations and analyzing the results☆16Feb 24, 2026Updated 2 months ago
- The RAVEN Toolbox for genome scale model reconstruction, curation and analysis.☆126Apr 19, 2026Updated last week
- CarveMe: genome-scale metabolic model reconstruction☆203Sep 12, 2025Updated 7 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- StrainDesign is a python package for the computational design of metabolic networks and based on COBRApy☆50Mar 23, 2026Updated last month
- Python package for creating, calibrating and simulating RBA models☆13Apr 8, 2026Updated 3 weeks ago
- Predicting Activated Sludge Microbial Communities based on time series of continuous sludge samples by using graph neural networks☆21Apr 15, 2026Updated 2 weeks ago
- Mackinac: A bridge between ModelSEED and COBRApy☆19Aug 20, 2018Updated 7 years ago
- mergem is a python package and command-line tool for merging, comparing, and translating genome-scale metabolic models☆14Aug 20, 2025Updated 8 months ago
- ☆24Oct 19, 2023Updated 2 years ago
- JBEI Quantitative Metabolic Modeling library☆13Feb 7, 2020Updated 6 years ago
- ☆16Dec 26, 2022Updated 3 years ago
- A machine learning-based tool for predicting metabolic modules in incomplete bacterial genomes.☆23Aug 14, 2025Updated 8 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.