a Graph database and R package for omic data integration
☆19Oct 28, 2016Updated 9 years ago
Alternatives and similar repositories for grinn
Users that are interested in grinn are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The splash, this is the reference documentation☆26Mar 23, 2026Updated 2 months ago
- Python parser for ISAtab, a biological file format for experimental metadata☆16Nov 24, 2016Updated 9 years ago
- A Tool for automated Optimization of XCMS Parameters☆34Nov 27, 2022Updated 3 years ago
- Metabolomics Tools for Galaxy☆21Nov 22, 2016Updated 9 years ago
- MSDK source code repository☆41Sep 22, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Computational method for Comparative ReConstruction of genome-scale metabolic networks☆22Mar 23, 2018Updated 8 years ago
- Train word2vec on Pubmed data, compare 2 GO terms, compare 2 genes.☆12Apr 7, 2017Updated 9 years ago
- Bondorder and formal charge determination for molecules☆10Jan 16, 2022Updated 4 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Goslin is the Grammar on succinct lipid nomenclature.☆13Apr 29, 2026Updated last month
- Machine learning for molecules workshop 2022☆13Nov 30, 2022Updated 3 years ago
- Repo hosting the MetFrag website☆11Apr 6, 2026Updated 2 months ago
- An R package to query EBI's Ontology Lookup Service (OLS)☆11Dec 10, 2025Updated 6 months ago
- Introduction to single-cell RNA-Seq analysis workshop☆15Feb 1, 2017Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Example using R on Amazon ec2☆10Jun 22, 2020Updated 5 years ago
- Markdown version of Cytoscape manual☆12Sep 27, 2025Updated 8 months ago
- OpenBabel wrapper package for R☆10Mar 12, 2026Updated 3 months ago
- ☆25Aug 5, 2025Updated 10 months ago
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆16Jun 1, 2023Updated 3 years ago
- Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure☆13Mar 27, 2026Updated 2 months ago
- Dockerized version of the EBI Ontology Lookup Service☆10Aug 14, 2019Updated 6 years ago
- Gene Set Enrichment Analysis in Python☆11Oct 26, 2018Updated 7 years ago
- Ninja Is Not Just Another OTU Picking Solution☆22Apr 23, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Structure Generator based on R-Group (SGRG)☆11Sep 28, 2019Updated 6 years ago
- Interactive benchmarking of ranking and assignment methods☆16May 14, 2026Updated last month
- Example R script to use Cytoscape via RESTful API module.☆28Apr 22, 2019Updated 7 years ago
- An R/shiny widget for cytoscape.js☆98Aug 6, 2024Updated last year
- Curation and analysis of metabolic models☆37Aug 8, 2023Updated 2 years ago
- R interface to Chemical Translation Service (CTS)☆17Jul 27, 2024Updated last year
- Package Objects☆12Jun 5, 2025Updated last year
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Mar 9, 2021Updated 5 years ago
- These workshops and tutorials provide use cases and examples for mass spectrometry data handling and analysis using the Spectra Bioconduc…☆22Aug 7, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Risa allows to access metadata/data in ISA-tab format and builds Bioconductor data structures. Apart from parsing ISA-tab files, the pack…☆20Oct 17, 2018Updated 7 years ago
- R Shiny app for CRI iAtlas, an interactive web portal for exploring immuno-oncology data. (iAtlas portal 2022 and beyond)☆15May 15, 2026Updated last month
- The open source version of the AWS ParallelCluster User Guide.☆25Jun 16, 2023Updated 3 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 10 months ago
- Improved contact predictions using the recognition of protein like contact patterns.☆14May 18, 2018Updated 8 years ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆20Jan 24, 2024Updated 2 years ago
- Semantic Similarity in Bio-Ontologies☆18Jan 30, 2026Updated 4 months ago