kwanjeeraw / grinnLinks
a Graph database and R package for omic data integration
☆20Updated 8 years ago
Alternatives and similar repositories for grinn
Users that are interested in grinn are comparing it to the libraries listed below
Sorting:
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10Updated 8 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 3 years ago
- Web application for enormous biological heatmaps☆66Updated 5 years ago
- Template for building a bioconductor workshop package using github actions☆20Updated last month
- R interface to morpheus.js heatmap widget☆38Updated 4 years ago
- Super high performance interactive heatmap software☆31Updated 6 years ago
- R interface to Chemical Translation Service (CTS)☆16Updated last year
- Reproducible GSEA Benchmarking☆13Updated 3 months ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 weeks ago
- A web app for exploratory data analysis of high-throughput screens (HTS)☆17Updated 6 years ago
- Interactive benchmarking of ranking and assignment methods☆16Updated 3 weeks ago
- iDEP: integrated Differential Expression & Pathway analysis☆14Updated 6 years ago
- [DEPRECATED] Docker containers for Bioconductor☆49Updated 2 years ago
- ☆17Updated 4 years ago
- a toolbox for metabolomic data analysis, visualization and ‘omic’ integration☆13Updated 7 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆21Updated 3 weeks ago
- FELLA: an R package for Metabolomics data enrichment through diffusion☆21Updated 4 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆44Updated 7 months ago
- Source code of the R packge BgeeDB to use data from the Bgee database☆16Updated 6 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated 3 months ago
- R/Shiny package for network-integrated pathway enrichment analysis☆14Updated 4 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- Bioconductor2017 workshop - Analysis of single-cell RNA-seq data: Normalization, dimensionality reduction, clustering, and lineage infere…☆11Updated 8 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆10Updated last year
- R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/☆41Updated 7 months ago
- Open-Source Software for Omic Data Analysis and Visualization☆35Updated this week
- Update RCytoscape to work for Cytoscape 3.0 and higher using CyREST☆16Updated 7 years ago
- Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…☆11Updated 5 years ago
- Introduction to Computational Biology☆32Updated 8 months ago
- The vignette provided has a basic sketch of the steps we interactively will go through to build a package with devtools, explains version…☆11Updated 5 years ago