Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) for ecological or biomedical research. This algorithm uses the information contained in the distribution of DNA sequences across samples along with sequence similarity to cluster sequences more accurately than β¦
β14Nov 20, 2018Updated 7 years ago
Alternatives and similar repositories for Distribution-based-clustering
Users that are interested in Distribution-based-clustering are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π the Great Automatic Nomenclator β The Next Million Names for Archaea and Bacteriaβ42Oct 28, 2025Updated 9 months ago
- The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service componentβ¦β11Sep 22, 2020Updated 5 years ago
- A manuscript exploring the effects of taxonomic bias on microbiome differential-abundance analysis.β12Oct 30, 2023Updated 2 years ago
- This project contains simple methods to measure sample relatedness and identify potential swaps and contaminationβ10Jan 8, 2016Updated 10 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomesβ25Aug 9, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Introduction to Nanopore Sequencing - Prac material and presentations from The Omics Australia Tutorials Sydney (TOAST) workshop 19th - 2β¦β10Jan 12, 2019Updated 7 years ago
- Annotate your metagenome assembliesβ11Jul 19, 2018Updated 8 years ago
- Source code of the Scalable Brain Atlas website (scalablebrainatlas.incf.org)β15Mar 18, 2016Updated 10 years ago
- the Metagenomic test for Presence Or Absence of Pathwaysβ13Mar 4, 2019Updated 7 years ago
- Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagationβ31May 25, 2021Updated 5 years ago
- Digital Database of Microbial Phenotypes. Like an online Bergey's Manual.β14Mar 1, 2012Updated 14 years ago
- Scotch pipeline for indel calling.β10Nov 25, 2019Updated 6 years ago
- Tools for extracting individual genomes from metagenomesβ16Dec 4, 2023Updated 2 years ago
- β19Dec 7, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Published in PLOS ONE. Phage-host interaction prediction tool that uses protein language models to represent the receptor-binding proteinβ¦β17Jul 13, 2025Updated last year
- MiGA: Microbial Genomes Atlasβ33Updated this week
- Homebrew tap for formulae to build ARB (http://www.arb-home.de) and related software.β14Jul 1, 2026Updated last month
- Ancestral Sequence Reconstruction in Pythonβ15May 9, 2019Updated 7 years ago
- Startups of Puerto Rico Platformβ16Nov 20, 2014Updated 11 years ago
- Tools for Working with Taxonomic SQL Databasesβ35Oct 28, 2025Updated 9 months ago
- Multinomial Logistic-Normal Models (really fast)β20May 22, 2026Updated 2 months ago
- Crowdsourcing a directory of cryptids and their range maps.β21Jul 16, 2023Updated 3 years ago
- Assembling phage particles one protein at a timeβ26Aug 3, 2026Updated last week
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Analysis with Profile Hidden Markov Modelsβ22Jan 23, 2026Updated 6 months ago
- Quantitative Insights Into Microbial Ecology - parsing and plotting functions for Rβ18May 19, 2017Updated 9 years ago
- Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), adβ¦β33Jul 12, 2020Updated 6 years ago
- Repository of the integrated mouse gut metagenomic catalogβ20Mar 14, 2022Updated 4 years ago
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.β12Oct 7, 2019Updated 6 years ago
- Sequencing and analysis of crAssphage regions from around the globeβ19Apr 7, 2020Updated 6 years ago
- Automate new Mac setupβ24Feb 12, 2026Updated 5 months ago
- Phage prediction toolsβ15Aug 1, 2023Updated 3 years ago
- Python API for the Interactive Tree of Life (iTOL)β39May 1, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- β15Dec 26, 2022Updated 3 years ago
- Search, download, and prepare brain atlas data.β17Mar 10, 2023Updated 3 years ago
- β12Oct 17, 2017Updated 8 years ago
- Utilities for community ecology analysisβ22Oct 2, 2020Updated 5 years ago
- Metaphor: a general-purpose workflow for assembly and binning of metagenomesβ40Nov 14, 2025Updated 8 months ago
- cnv-seq with custom bugfixβ10Mar 23, 2013Updated 13 years ago
- viralComplete: BLAST-based viral completeness verificationβ23Oct 4, 2021Updated 4 years ago