Alternatives and similar repositories for Distribution-based-clustering:

Users that are interested in Distribution-based-clustering are comparing it to the libraries listed below

• tseemann / mokka
  Annotate your metagenome assemblies
  ☆11Updated 6 years ago
• borenstein-lab / fishtaco
  FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…
  ☆24Updated 3 years ago
• bcthomas / pullseq
  Utility program for extracting sequences from a fasta/fastq file
  ☆36Updated 3 months ago
• orangeSi / GSSplayground
  Lightweight single-html-file-based Genome Segments playground for Visualize genome features cluster(gene arrow map or other features), ad…
  ☆32Updated 4 years ago
• Askarbek-orakov / ASAR
  Advanced metagenomic Sequence Analysis in R
  ☆15Updated 6 years ago
• hallamlab / LCAStar
  Alternative taxonomic consensus algorithms based on the NCBI taxonomy tree
  ☆16Updated 10 months ago
• nickloman / poredb
  ☆19Updated 8 years ago
• rpetit3 / fastq-scan
  Output FASTQ summary statistics in JSON format
  ☆29Updated 2 years ago
• kbaseattic / genome_annotation
  The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service component…
  ☆10Updated 4 years ago
• sourmash-bio / databases
  Build sourmash databases for genbank.
  ☆12Updated last year
• donovan-h-parks / biolib
  Python package for common tasks in bioinformatic.
  ☆13Updated last year
• wwood / OrfM
  simple and not slow ORF caller
  ☆21Updated 6 years ago
• biocore / wol
  Reference Phylogeny for Bacterial and Archaeal Genomes
  ☆25Updated 2 years ago
• lmward / MetaPOAP
  the Metagenomic test for Presence Or Absence of Pathways
  ☆13Updated 6 years ago
• Microbiology / ccontigs
  Detect contigs of complete circular genomes
  ☆23Updated 5 years ago
• linsalrob / partie
  PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…
  ☆25Updated 2 years ago
• edgraham / BinSanity
  Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation
  ☆29Updated 3 years ago
• EvolBioInf / fur
  Find Unique genomic Regions
  ☆29Updated 2 weeks ago
• tillrobin / iMGMC
  Repository of the integrated mouse gut metagenomic catalog
  ☆20Updated 3 years ago
• combogenomics / CONTIGuator
  Bacterial genomes finishing tool for structural insights on draft genomes
  ☆24Updated last year
• sharpton / shotmap
  A Shotgun Metagenome Annotation Pipeline
  ☆23Updated 8 years ago
• Ecogenomics / gtdb-species-clusters
  Toolkit for establishing, updating, and validating GTDB species clusters
  ☆20Updated last week
• hcdenbakker / colorid
  Experiments with using BIGSI data structure for metagenomic and QC applications
  ☆19Updated 8 months ago
• COMBINE-lab / RapClust
  Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes
  ☆31Updated 10 months ago
• marbl / MetagenomeScope
  Visualization tool for (meta)genome assembly graphs
  ☆23Updated last year
• pirovc / metameta
  ☆23Updated 5 years ago
• phac-nml / refseq_masher
  Mash MinHash search your nucleotide sequences against a NCBI RefSeq genomes database
  ☆41Updated 4 years ago
• merenlab / MerenLab-workflows
  A repository with scripts to run pipeline that are commonly used in the Meren Lab
  ☆11Updated 7 years ago
• sanger-pathogens / gff3toembl
  Converts Prokka GFF3 files to EMBL files for uploading annotated assemblies to EBI
  ☆29Updated 6 years ago
• CAMI-challenge / OPAL
  OPAL: Open-community Profiling Assessment tooL
  ☆28Updated 3 months ago