yexinhai / genomics-analysis-pipeline
Some useful bioinformatics pipelines for genomics analysis
☆14Updated 3 years ago
Alternatives and similar repositories for genomics-analysis-pipeline:
Users that are interested in genomics-analysis-pipeline are comparing it to the libraries listed below
- ☆14Updated 2 years ago
- Set of script for the paper on the cattle graph genome☆13Updated 2 years ago
- ☆23Updated last year
- Long Read Based SV Calling Tools Analysis☆11Updated 10 months ago
- issues for semina "Data Visulization"☆12Updated last year
- ☆14Updated last year
- Killifish genomics scripts☆12Updated 3 years ago
- Construct and Analyze the North American Vitis pangenome☆21Updated last year
- Scripts that used in our chicken T2T manuscript.☆19Updated last year
- Main scripts and commands used to analyze goat population genetic and domestication☆20Updated 5 years ago
- ☆11Updated 6 months ago
- Scripts used to perform analyses in Rice et al. (2023)☆15Updated last year
- The tools are used for displaying hic signal of genome☆23Updated 4 years ago
- Whole Genome Annotation Pipeline☆15Updated 10 months ago
- Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…☆17Updated 7 months ago
- ☆10Updated 3 years ago
- ☆15Updated 3 years ago
- B73Ab10 genome assembly methods☆16Updated 3 years ago
- ☆16Updated 3 years ago
- ☆16Updated 5 years ago
- Inferring natural selection by comparative population genomic analysis across species☆23Updated last year
- “When everything is connected to everything else, for better or worse, everything matters.” Bruce Mau☆18Updated 4 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆11Updated 6 years ago
- The repository for codes developed to generated the Maize NC358 assemblies and analyses.☆11Updated 4 years ago
- Characterization of Structural Variation in Chinese samples☆18Updated 3 years ago
- ☆13Updated last year
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆14Updated 6 months ago
- SINE annotation tool for plant genomes☆17Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆17Updated 3 months ago
- Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.☆10Updated 4 years ago