mcstitzer / maize_genomic_ecosystemLinks
☆11Updated 2 years ago
Alternatives and similar repositories for maize_genomic_ecosystem
Users that are interested in maize_genomic_ecosystem are comparing it to the libraries listed below
Sorting:
- A repo contains historical and updated MTEC libraries.☆18Updated 5 years ago
- ☆11Updated 10 years ago
- The GitHub repository for the A. thaliana pan-NLR'ome project.☆17Updated 6 years ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- R package to draw syntenic plots in 3 different styles☆41Updated last year
- These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to fo…☆15Updated 7 years ago
- ☆15Updated 4 years ago
- scripts for the project of seven thaliana genomes assembly☆38Updated 4 years ago
- A box of genomics tools☆21Updated 4 years ago
- ☆16Updated 7 months ago
- ☆13Updated last year
- ☆15Updated 5 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- Hapmap-v1☆11Updated 5 years ago
- A tool for recovering synteny blocks from multiple alignment☆30Updated 3 years ago
- ☆30Updated last month
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆26Updated 2 months ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆24Updated 3 years ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Updated 4 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- A stand-alone application for constructing websites for visualizing and browsing synteny blocks☆18Updated 4 years ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Updated 5 years ago
- Transposable element polymorphism identification☆33Updated 4 years ago
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- Transposable Elements MOvement detection using LOng reads☆21Updated 3 weeks ago
- read and analyse RepeatMasker output☆24Updated 2 years ago
- Easily construct the ML species tree with single-copy gene shared by different species.☆26Updated 6 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- scripts to parse and analyse MCScanX collinearity output☆31Updated 5 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago