A visualization tool for studying chromosomal rearrangements through interactive synteny block analysis and chromosome breakpoint mapping.
β11Apr 27, 2026Updated 3 weeks ago
Alternatives and similar repositories for CHITRA
Users that are interested in CHITRA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GSFetch is a powerful shell script designed to facilitate the batch downloading of genomic data using ncbi-datasetsβ10Jan 15, 2026Updated 4 months ago
- π Building a Streamlit boilerplate with Streamlit, SQLite DB, and REST API.β25Mar 6, 2025Updated last year
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signalsβ10May 17, 2024Updated 2 years ago
- β13Nov 15, 2017Updated 8 years ago
- Gene Family Annotation Workflowβ12Mar 26, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways β’ AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Annotate Olfactory receptor CDS from genomeβ11Apr 29, 2023Updated 3 years ago
- The complete sequence of a Chinese individualβ12Oct 8, 2024Updated last year
- Tree reconstruction of ancestry using incomplete lineage sortingβ11Jan 9, 2026Updated 4 months ago
- Renames headers in FASTA fileβ13Jun 28, 2017Updated 8 years ago
- An R package to perform systematic quality checks on comparative genomics analysesβ12Mar 5, 2026Updated 2 months ago
- Estimating gene family turnover rates by likelihood-based methodsβ12Aug 17, 2020Updated 5 years ago
- CLfinder-OrthNet, a pipeline to encode orthologs from multiple genomes and their evolutionary history into networks (OrthNets) based on cβ¦β10Jun 9, 2022Updated 3 years ago
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkitβ11Jan 17, 2020Updated 6 years ago
- Calculate the dn/ds (also pn and ps) value of cdsβ14Jul 11, 2020Updated 5 years ago
- Open source password manager - Proton Pass β’ AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Figures for the CHM13 T2T SD paper.β12Sep 12, 2021Updated 4 years ago
- De-novo Assembly Structural Variant Callerβ13Sep 15, 2016Updated 9 years ago
- From the comparison of two extant genomes and corresponding gene families, PhylDiag detects conserved segments, i.e. segments of chromosoβ¦β15Aug 7, 2023Updated 2 years ago
- Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADsβ11Dec 21, 2019Updated 6 years ago
- Newick tree processingβ13Mar 25, 2026Updated last month
- Code for TAD_SV projectβ11Mar 16, 2022Updated 4 years ago
- Data visualization with Rβ12Dec 12, 2020Updated 5 years ago
- bisulfite sequencing pipeline from fastq to methylation reportsβ13Apr 10, 2026Updated last month
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomicsβ24Apr 28, 2026Updated 3 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform β’ AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- β12Feb 16, 2026Updated 3 months ago
- Some useful gadgetsβ12Mar 14, 2022Updated 4 years ago
- BioCarta pathway imagesβ11Jan 30, 2026Updated 3 months ago
- β11Sep 11, 2020Updated 5 years ago
- scripts used to analyse horizontal transfer and evolution of transposable elements in 307 vertebrate speciesβ11May 16, 2021Updated 5 years ago
- VESPA: Very large-scale Evolutionary and Selective Pressure Analysesβ15Mar 18, 2022Updated 4 years ago
- For QMUL's Genome Bioinformatics MSc module BIO721P & SIB's Spring school in bioinfo & population genomicsβ13Oct 1, 2024Updated last year
- tool for dating gene age by micro- and macro-synteny with high speed and accuracyβ15Jan 3, 2026Updated 4 months ago
- A Swiss-Army-Knife for Bioinformaticiansβ15May 11, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer β’ AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.β13Mar 5, 2021Updated 5 years ago
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomesβ12Aug 31, 2018Updated 7 years ago
- β13Apr 7, 2023Updated 3 years ago
- β13Nov 13, 2018Updated 7 years ago
- Killifish genomics scriptsβ12Feb 19, 2021Updated 5 years ago
- Interspecies Point Projection - A tool for comparative genomics beyond alignable sequenceβ27Apr 16, 2026Updated last month
- β11Jul 4, 2022Updated 3 years ago