A series of scripts to automate sequence workflows
☆19Apr 7, 2026Updated 2 months ago
Alternatives and similar repositories for sequence_handling
Users that are interested in sequence_handling are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆12Aug 31, 2018Updated 7 years ago
- Utilities for analyzing next generation sequencing data.☆16May 7, 2021Updated 5 years ago
- ☆15Mar 20, 2023Updated 3 years ago
- GWAS analysis process based on EMMAX software☆19Dec 12, 2023Updated 2 years ago
- ☆17Nov 26, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Jun 12, 2023Updated 3 years ago
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 7 years ago
- Tools for inference of the DFE with dadi☆15Apr 16, 2021Updated 5 years ago
- ☆13May 16, 2016Updated 10 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Sweep Inference Framework (controlling for correlation)☆29Jul 10, 2024Updated last year
- ☆10Feb 25, 2024Updated 2 years ago
- Bedfile perturbation tool☆17Mar 6, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- toolkit to process gtf files☆17Dec 24, 2021Updated 4 years ago
- Adapters for trimming☆30Jan 30, 2019Updated 7 years ago
- Repository☆10Oct 23, 2024Updated last year
- PSMC-based Migration and Split Time Inference (MiSTI) from two genomes☆12Mar 20, 2026Updated 3 months ago
- Repository for pipeline code☆26Feb 28, 2024Updated 2 years ago
- The fastest VCF/BCF parser in R https://doi.org/10.1093/bioinformatics/btae049☆20Mar 31, 2026Updated 2 months ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Bioinformatics scripts for genome analysis☆17Oct 26, 2022Updated 3 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Jun 18, 2026Updated last week
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- RNA-seq workflow for Snakemake based on STAR and featureCounts.☆23May 25, 2019Updated 7 years ago
- A fast, easy way to present complex bioinformatics pipelines to biologists☆12Sep 28, 2018Updated 7 years ago
- PHYLIP package starting with version 4.0a☆20Jun 11, 2026Updated 2 weeks ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- ☆29Sep 23, 2019Updated 6 years ago
- machine learning applications for dadi☆17Jan 23, 2025Updated last year
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 6 years ago
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆29Feb 28, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Mar 20, 2023Updated 3 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Feb 17, 2026Updated 4 months ago
- R package for 'Bayesian multivariate analysis of summary statistics' (Stephens Lab)☆10Sep 17, 2020Updated 5 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 3 years ago
- Notes by Markdown in HZAU Bioinformatics Courses☆13Dec 16, 2025Updated 6 months ago
- ☆10May 17, 2022Updated 4 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Data☆12Jun 7, 2018Updated 8 years ago