pfh / topconfects
TOP results by CONfident efFECT Sizes.
☆14Updated last year
Related projects ⓘ
Alternatives and complementary repositories for topconfects
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 6 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated 8 months ago
- A small R package to make sequencing read coverage plots in R.☆37Updated 2 years ago
- Genomic plot in trellis layout☆39Updated 8 months ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆42Updated this week
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated last month
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 2 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆15Updated 5 years ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.☆14Updated 10 years ago
- An extension class of SummarizedExperiment to allow hierarchical structure on the row or column dimension☆13Updated 3 years ago
- R interface to megadepth: BigWig and BAM related utilities☆11Updated 6 months ago
- Differential expression and allelic analysis, nonparametric statistics☆27Updated last year
- ☆10Updated 5 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated last year
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 5 years ago
- ☆28Updated 4 months ago
- 📊 An R package of RNA-seq workflow☆15Updated 2 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆29Updated last month
- Bioconductor package that makes BIG data pint-sized.☆20Updated 9 months ago
- R package to quickly obtain count vectors from indexed bam files☆13Updated 3 years ago
- Toolkit for QTL mapping and meta-analysis.☆16Updated 2 years ago
- A tidy interface for coverage analysis☆24Updated 4 years ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆19Updated 4 years ago
- interactive plots for differential expression analysis☆25Updated 2 months ago
- Lollipop-diagram to interactively visualize genetic mutations☆29Updated 2 months ago
- ☆19Updated 2 weeks ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆32Updated 2 years ago