☆12Nov 16, 2023Updated 2 years ago
Alternatives and similar repositories for NAEPro
Users that are interested in NAEPro are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The codebase for EnzyGen2☆30Apr 20, 2026Updated 3 months ago
- Inpainting protein sequence and structure☆13Nov 10, 2023Updated 2 years ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Sep 18, 2023Updated 2 years ago
- ☆33Feb 5, 2025Updated last year
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆110May 25, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆12Dec 28, 2023Updated 2 years ago
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- Evolutionary Algorithm with Diffusion Models for Protein Design☆31Jan 7, 2026Updated 7 months ago
- ☆43Jun 12, 2025Updated last year
- A deep learning-based predictor of enzyme optimal pH☆12Jun 25, 2025Updated last year
- Environment for developing substructure-aware protein models☆16Mar 26, 2026Updated 4 months ago
- ☆15Jun 19, 2026Updated last month
- ☆33Dec 6, 2025Updated 8 months ago
- Flexibility-conditioned protein structure design☆36Mar 10, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Controllable Protein Sequence Generation with LLM Preference Optimization, AAAI 2025☆17Mar 10, 2025Updated last year
- A series of scripts that facilitate the prediction of user-defined protein structural properties using AlphaFold2☆12Aug 28, 2023Updated 2 years ago
- [NeurIPS 25 Spotlight] Protein Design with Dynamic Protein Vocabulary☆21Nov 23, 2025Updated 8 months ago
- ☆10Nov 10, 2023Updated 2 years ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- This repository is the official implementation of Bidirectional Learning for Offline Infinite-width Model-based Optimization (NeurIPS 202…☆14Jan 19, 2023Updated 3 years ago
- Official implementation of the paper "DiffSDS: A Language Diffusion Model for Protein Backbone Inpainting under Geometric Conditions and …☆14Jun 25, 2023Updated 3 years ago
- [ICLR 2024] ProFSA: Self-supervised Pocket Pretraining via Protein Fragment-Surroundings Alignment☆23Jun 3, 2024Updated 2 years ago
- Code and model weights for PoET-2, a retrieval-augmented multimodel protein language model for protein sequence generation and representa…☆27Aug 20, 2025Updated 11 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆13Jul 24, 2025Updated last year
- Bayesian Optimization for protein design and mining☆27Jul 2, 2026Updated last month
- HBDesigner is an algorithm that designs highly-connected hydrogen bonding networks that fit the requested design constraints onto an inpu…☆17Aug 5, 2026Updated last week
- Cross-protein transfer learning for variant effect prediction☆21Sep 13, 2023Updated 2 years ago
- ☆16Dec 10, 2024Updated last year
- ☆21Nov 21, 2025Updated 8 months ago
- Rank binders by structure modeling☆17Apr 10, 2026Updated 4 months ago
- Official Implementation of AMix-1, a Test-Time Scalable Protein Language Model.☆28Dec 10, 2025Updated 8 months ago
- ☆64Sep 14, 2023Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- GraphPart, a data partitioning method for ML on biological sequences☆36Oct 26, 2023Updated 2 years ago
- ☆22Jan 23, 2026Updated 6 months ago
- Aligning protein generative models with experimental fitness☆125Mar 12, 2026Updated 5 months ago
- ☆118Jan 3, 2026Updated 7 months ago
- ☆24Nov 6, 2024Updated last year
- Deploying synthetic coevolution and machine learning to engineer protein-protein interactions☆17Jul 30, 2023Updated 3 years ago
- Joint Neural Model for Entity & Relation Extraction☆16Oct 18, 2021Updated 4 years ago