Alternatives and similar repositories for NAEPro:

Users that are interested in NAEPro are comparing it to the libraries listed below

• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆31Updated 3 months ago
• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆33Updated 9 months ago
• A4Bio / FoldToken_open
  ☆13Updated 3 months ago
• HannesStark / CodonMPNN
  ☆26Updated 2 months ago
• petergroth / kermut
  This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …
  ☆17Updated 2 months ago
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆30Updated 2 months ago
• PKUliujl / GeoSeqBuilder
  ☆25Updated 3 weeks ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆33Updated 5 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆31Updated last year
• DeepGraphLearning / S3F
  Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)
  ☆30Updated 3 months ago
• protddg-bench / protddg-bench
  Scoring methods for predicting the DDG upon protein mutation
  ☆14Updated 2 years ago
• EureKaZhu / DiffAffinity
  Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)
  ☆32Updated last year
• pengzhangzhi / Awesome-List-Protein-Binding-Site-Prediction-
  List of papers on protein binding site prediction
  ☆11Updated last year
• bzho3923 / ProtLGN
  ☆28Updated 6 months ago
• skalyaanamoorthy / PSLMs
  ☆18Updated 4 months ago
• wangxr0526 / EasIFA
  Code of “Multi-Modal Deep Learning Enables Ultrafast and Accurate Annotation of Enzymatic Active Sites”
  ☆26Updated 2 weeks ago
• WeiLab-Biology / DeepProSite
  ☆31Updated last year
• bzho3923 / CPDiffusion
  ☆21Updated 4 months ago
• anirudhvenk / antibody-dpo
  ☆16Updated 2 months ago
• tyang816 / VenusREM
  🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion.
  ☆36Updated this week
• kirjner / GGS
  This repository implements Gibbs sampling with Graph-based Smoothing
  ☆37Updated 9 months ago
• pgmikhael / clipzyme
  Reaction-Conditioned Virtual Screening of Enzymes
  ☆27Updated 3 months ago
• Graylab / MaskedProteinEnT
  ☆11Updated 3 months ago
• HongzhouTang / BayeStab
  this is the BateStab program
  ☆4Updated 2 years ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated last week
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 7 months ago
• KrishnaswamyLab / ProtSCAPE
  ☆16Updated 5 months ago
• karma211225 / KarmaLoop
  Highly accurate and efficient deep learning paradigm for full-atom protein loop modeling with KarmaLoop
  ☆11Updated 8 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆41Updated 2 months ago