Python rich client for visual protein Sequence to Structure Analysis
☆22Mar 31, 2026Updated 6 months ago
Alternatives and similar repositories for PySSA
Users that are interested in PySSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13May 24, 2026Updated 4 months ago
- ☆11Mar 28, 2024Updated 2 years ago
- ☆22Dec 15, 2024Updated last year
- ☆11Mar 18, 2024Updated 2 years ago
- Protein-peptide docking with ESMFold language model☆16May 30, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An open-source Rust implementation of Shape Complementarity (SC)☆20Oct 2, 2025Updated last year
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexes☆55Sep 15, 2026Updated 3 weeks ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆19Apr 16, 2025Updated last year
- ☆18Mar 13, 2024Updated 2 years ago
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer☆43Oct 9, 2024Updated last year
- ☆17Jan 13, 2026Updated 8 months ago
- Combines FRESEAN mode analysis of a protein (based on a CG representation) with enhanced sampling using metadynamics☆17May 7, 2026Updated 5 months ago
- MDverse web scrapper 🔎🔧📄☆15Feb 21, 2026Updated 7 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- The package of ProBuilder from Longxing Cao lab☆26Jan 19, 2026Updated 8 months ago
- Pharmacophore Elucidation with Convolutional Neural Networks and Reinforcement Learning☆17Apr 7, 2025Updated last year
- ☆40Sep 17, 2024Updated 2 years ago
- Protein folding in Pymol☆149Nov 23, 2025Updated 10 months ago
- Metadiffusion implemented in Boltz-2☆25Feb 23, 2026Updated 7 months ago
- ☆17Jun 3, 2025Updated last year
- LIVIA (Local Interaction VIsualization and Analysis) — Analyze and visualize protein interaction interfaces from structure predictions. B…☆27Updated this week
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆81Mar 27, 2025Updated last year
- Associated code/pipeline for the publication "AI-assisted protein design to rapidly convert antibody sequences to intrabodies targeting d…☆16Feb 18, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Interpretable, protein structure-based prediction of missense variant deleteriousness.☆23Aug 6, 2025Updated last year
- Bayesian Optimization for protein design and mining☆28Jul 2, 2026Updated 3 months ago
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data☆42Jun 19, 2026Updated 3 months ago
- Pretrained METL models with minimal dependencies☆16Sep 16, 2026Updated 3 weeks ago
- Weighted Ensemble Data Analysis and Plotting☆27Jul 17, 2026Updated 2 months ago
- A semi-automated force field converter for GROMACS. Enables users to easily convert a system between two all-atom force fields. Requires …☆18Aug 1, 2026Updated 2 months ago
- Multiscale Simulation Tool for Backmapping☆22Mar 13, 2026Updated 6 months ago
- ☆74Feb 13, 2026Updated 7 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- [JCIM 2026] Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆32Aug 20, 2026Updated last month
- ☆34May 31, 2023Updated 3 years ago
- A bare-metal Python library for building and manipulating the molecular structures of proteins, nucleic acids, and small organic molecule…☆20Updated this week
- HBDesigner is an algorithm that designs highly-connected hydrogen bonding networks that fit the requested design constraints onto an inpu…☆21Updated this week
- Official repository for DiffPepBuilder and DiffPepDock tools☆134Oct 24, 2025Updated 11 months ago
- ☆15May 29, 2024Updated 2 years ago
- This is the first model that can simultaneously predict the RMSD of the ligand docking pose and the binding strength against the target.☆22Jan 4, 2025Updated last year