Python rich client for visual protein Sequence to Structure Analysis
☆22Mar 31, 2026Updated 4 months ago
Alternatives and similar repositories for PySSA
Users that are interested in PySSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13May 24, 2026Updated 2 months ago
- ☆11Mar 28, 2024Updated 2 years ago
- ☆22Dec 15, 2024Updated last year
- Protein-peptide docking with ESMFold language model☆16May 30, 2026Updated 2 months ago
- An open-source Rust implementation of Shape Complementarity (SC)☆18Oct 2, 2025Updated 10 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- A pipeline that used ML model based on Rosetta descriptors to predict the binding affinity of protein-protein complexes☆53Oct 27, 2025Updated 9 months ago
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆16Apr 16, 2025Updated last year
- ☆18Mar 13, 2024Updated 2 years ago
- Lightweight induced fit docking☆22May 22, 2023Updated 3 years ago
- FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer☆42Oct 9, 2024Updated last year
- ☆17Jan 13, 2026Updated 6 months ago
- The package of ProBuilder from Longxing Cao lab☆22Jan 19, 2026Updated 6 months ago
- Combines FRESEAN mode analysis of a protein (based on a CG representation) with enhanced sampling using metadynamics☆17May 7, 2026Updated 3 months ago
- MDverse web scrapper 🔎🔧📄☆15Feb 21, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pharmacophore Elucidation with Convolutional Neural Networks and Reinforcement Learning☆18Apr 7, 2025Updated last year
- LIVIA (Local Interaction VIsualization and Analysis) — Analyze and visualize protein interaction interfaces from structure predictions. B…☆24Updated this week
- ☆40Sep 17, 2024Updated last year
- Protein folding in Pymol☆148Nov 23, 2025Updated 8 months ago
- Metadiffusion implemented in Boltz-2☆24Feb 23, 2026Updated 5 months ago
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆77Mar 27, 2025Updated last year
- ☆16Jun 3, 2025Updated last year
- Associated code/pipeline for the publication "AI-assisted protein design to rapidly convert antibody sequences to intrabodies targeting d…☆15Feb 18, 2025Updated last year
- Interpretable, protein structure-based prediction of missense variant deleteriousness.☆23Aug 6, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bayesian Optimization for protein design and mining☆26Jul 2, 2026Updated last month
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆18Nov 14, 2023Updated 2 years ago
- Pretrained METL models with minimal dependencies☆16Sep 18, 2025Updated 10 months ago
- mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data☆41Jun 19, 2026Updated last month
- Weighted Ensemble Data Analysis and Plotting☆27Jul 17, 2026Updated 3 weeks ago
- A semi-automated force field converter for GROMACS. Enables users to easily convert a system between two all-atom force fields. Requires …☆17Aug 1, 2026Updated last week
- Multiscale Simulation Tool for Backmapping☆22Mar 13, 2026Updated 4 months ago
- ☆74Feb 13, 2026Updated 5 months ago
- Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆29Jul 6, 2026Updated last month
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆33May 31, 2023Updated 3 years ago
- A bare-metal Python library for building and manipulating the molecular structures of proteins, nucleic acids, and small organic molecule…☆20Updated this week
- HBDesigner is an algorithm that designs highly-connected hydrogen bonding networks that fit the requested design constraints onto an inpu…☆17Updated this week
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆15Aug 1, 2026Updated last week
- Official repository for DiffPepBuilder and DiffPepDock tools☆129Oct 24, 2025Updated 9 months ago
- ☆15May 29, 2024Updated 2 years ago
- This is the first model that can simultaneously predict the RMSD of the ligand docking pose and the binding strength against the target.☆21Jan 4, 2025Updated last year