beckham-lab / EpHodLinks
Machine learning prediction of enzyme optimum pH
☆45Updated 4 months ago
Alternatives and similar repositories for EpHod
Users that are interested in EpHod are comparing it to the libraries listed below
Sorting:
- ☆30Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 3 months ago
- Machine learning prediction of enzyme optimum pH☆18Updated 4 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆65Updated 10 months ago
- ☆52Updated last month
- GTalign, high-performance protein structure alignment, superposition and search☆50Updated last month
- Fast indexing and search of discontinuous motifs in protein structures☆81Updated last week
- Kuhlman Lab Installation of AlphaFold3☆30Updated this week
- ML-optimized library design with improved fitness and diversity for protein engineering☆35Updated last year
- ☆27Updated last month
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆63Updated last year
- ☆45Updated 8 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆52Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆66Updated 2 months ago
- ☆43Updated 11 months ago
- ☆71Updated 6 months ago
- Code for deep learning guided design of dynamic proteins☆29Updated last year
- Predicts the solubility and usability for purification of proteins expressed in E. coli using protein language models☆39Updated 9 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated last month
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ☆28Updated 7 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆27Updated 6 months ago
- ☆25Updated 2 years ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 2 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆30Updated last year
- Graph Network for protein-protein interface including language model features☆32Updated last year
- A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.☆19Updated last month
- ☆21Updated last year
- Python package to atom map, correct and suggest enzymatic reactions☆39Updated last year
- ML toolset for creating TED: The Encyclopedia of Domains☆22Updated 3 months ago