Deep learning tools for peptide substrate prediction and generation
☆46Jul 24, 2026Updated 2 months ago
Alternatives and similar repositories for cleavenet
Users that are interested in cleavenet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆29Feb 23, 2026Updated 7 months ago
- Collection of tools to calculate properties of natural or synthetic peptides and proteins.☆77Apr 13, 2026Updated 5 months ago
- Extension of ThermoMPNN for double mutant predictions☆66Mar 23, 2026Updated 6 months ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆30Jul 7, 2023Updated 3 years ago
- R Shiny application "Vaccine Designer" aiming for the construction of vaccine sequences based on multi epitope design workflow.☆11Jun 25, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆88Oct 23, 2024Updated last year
- ☆98Oct 23, 2025Updated 11 months ago
- EvolveX, a de novo antibody computational design pipeline.☆24Sep 18, 2025Updated last year
- PPI version of Pythia☆38Jun 13, 2026Updated 3 months ago
- ☆19Aug 31, 2025Updated last year
- ☆42Mar 7, 2026Updated 7 months ago
- ☆31Mar 21, 2025Updated last year
- ☆103Jul 9, 2026Updated 3 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆117Apr 15, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- [𝐧𝐚𝐭𝐮𝐫𝐞 𝐦𝐚𝐜𝐡 𝐢𝐧𝐞 𝐢𝐧𝐭𝐞𝐥𝐥𝐢𝐠𝐞𝐧𝐜𝐞] ImmunoStruct enables multimodal deep learning for immunogenicity prediction☆50Updated this week
- Official Implementation of IgGM☆232May 28, 2026Updated 4 months ago
- pepADMET: a novel computational platform for systematic ADMET evaluation of peptides☆27Oct 21, 2025Updated 11 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆164Jul 10, 2026Updated 3 months ago
- ☆58Apr 1, 2025Updated last year
- Public version for Distance-AF☆32Aug 17, 2025Updated last year
- [JCIM 2026] Biasing Conformational Sampling in AlphaFold 3 and Boltz-2 via Pair Representation Scaling☆32Aug 20, 2026Updated last month
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆137Oct 30, 2025Updated 11 months ago
- Protein stability prediction using rewired protein generative models☆98Jul 15, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆56Apr 22, 2026Updated 5 months ago
- In silico directed evolution of peptide binders with AlphaFold☆280Sep 25, 2026Updated 2 weeks ago
- Improved antibody structure-based design using inverse folding☆176Sep 27, 2026Updated last week
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆147Apr 27, 2026Updated 5 months ago
- Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction☆14Apr 23, 2024Updated 2 years ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆87Oct 24, 2025Updated 11 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆96Jul 31, 2026Updated 2 months ago
- Protein Language Modeling beyond static folds reveals sequence-encoded flexibility☆37Feb 1, 2026Updated 8 months ago
- ☆539Sep 23, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A curated, interactive directory of protein design research groups worldwide.☆20Sep 19, 2026Updated 3 weeks ago
- A fine-tuned version of ProteinMPNN for generating stable cyclic peptide sequences☆52Jun 30, 2026Updated 3 months ago
- Boltzina: Efficient and Accurate Virtual Screening via Docking-Guided Binding Prediction with Boltz-2☆101May 16, 2026Updated 4 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 11 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆65Jan 28, 2026Updated 8 months ago
- [Adv. Sci. 2025] PRO-LDM: A Conditional Latent Diffusion Model for Protein Sequence Design and Functional Optimization☆15Jul 11, 2025Updated last year
- OVO, an open-source ecosystem for de novo protein design☆142Sep 18, 2026Updated 3 weeks ago