Machine learning prediction of enzyme optimum pH
☆27Apr 29, 2025Updated last year
Alternatives and similar repositories for EpHod
Users that are interested in EpHod are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Machine learning prediction of enzyme optimum pH☆56Apr 29, 2025Updated last year
- A predictor of enzyme optimal temperature☆18Mar 13, 2025Updated last year
- A deep learning-based predictor of enzyme optimal pH☆12Jun 25, 2025Updated last year
- A command-line tool for profiling CAZyme abundances in metagenomic datasets.☆41Updated this week
- Official repository for the Protriever paper☆17Jun 5, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Consolidated repository to perform RLXF☆43Jul 17, 2026Updated last week
- ☆20Nov 21, 2025Updated 8 months ago
- [NeurIPS 25 Spotlight] Protein Design with Dynamic Protein Vocabulary☆21Nov 23, 2025Updated 8 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆94Jun 26, 2026Updated last month
- ☆40Mar 30, 2025Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 5 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 8 months ago
- Protein representation and design under a single training scheme☆24May 17, 2026Updated 2 months ago
- ☆12Nov 16, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Deep learning based prediction of temperature dependent enzyme turnover rates☆18Nov 24, 2024Updated last year
- Extension of ThermoMPNN for double mutant predictions☆63Mar 23, 2026Updated 4 months ago
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Aug 21, 2025Updated 11 months ago
- Code for the paper "Collaborative Graph Walk for Semi-supervised Multi-Label Node Classification" - ICDM 2019☆13Mar 25, 2023Updated 3 years ago
- ☆24Nov 6, 2024Updated last year
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆84May 25, 2026Updated 2 months ago
- ☆73May 18, 2026Updated 2 months ago
- Protein function prediction using protein structures and deep graph neural networks.☆22Jan 24, 2025Updated last year
- Unleash MMseqs2’s power for your protein and nucleotide sequence analysis. Fast, simple, seamless!☆47Jun 25, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Official Implementation of AMix-1, a Test-Time Scalable Protein Language Model.☆27Dec 10, 2025Updated 7 months ago
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆322Apr 6, 2025Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 2 years ago
- ESMDynamic repo☆25Jun 26, 2026Updated last month
- Multi-label subcellular localization and sorting signal prediction based on protein foundation models☆30Jan 12, 2026Updated 6 months ago
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Mar 16, 2025Updated last year
- Deep neural network based prediction model for gene essentiality prediction in microbes☆10Feb 11, 2021Updated 5 years ago
- ☆32Feb 5, 2025Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆83Oct 24, 2025Updated 9 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆78Jul 2, 2025Updated last year
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 4 months ago
- A geometric foundation model for enzyme retrieval with evolutionary insights.☆99Jul 13, 2026Updated last week
- ☆43Jun 12, 2025Updated last year
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆259Mar 26, 2026Updated 4 months ago
- Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) …☆14Nov 20, 2018Updated 7 years ago
- BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow☆45Aug 21, 2024Updated last year