jafetgado / EpHodLinks
Machine learning prediction of enzyme optimum pH
☆23Updated 9 months ago
Alternatives and similar repositories for EpHod
Users that are interested in EpHod are comparing it to the libraries listed below
Sorting:
- Machine learning prediction of enzyme optimum pH☆50Updated 9 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆36Updated 2 months ago
- ☆30Updated 3 months ago
- Extension of ThermoMPNN for double mutant predictions☆53Updated 3 months ago
- One protein is all you need☆64Updated last month
- Kuhlman Lab Installation of AlphaFold3☆38Updated 4 months ago
- ☆73Updated 10 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆78Updated 3 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46Updated 8 months ago
- Official repository for the ProteinDJ protein design pipeline☆83Updated last week
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Updated 5 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆71Updated last year
- Fast indexing and search of discontinuous motifs in protein structures☆113Updated this week
- ☆56Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Updated 2 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆118Updated 2 months ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Updated last year
- Efficient manipulation of protein structures in Python☆61Updated 4 months ago
- ☆47Updated last year
- ☆53Updated 7 months ago
- ☆31Updated 2 weeks ago
- ☆15Updated 8 months ago
- A python package and collection of scripts for computing protein surface meshes, chemical, electrostatic, geometric features, and buildin…☆27Updated 6 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆77Updated last month
- Analysis of alphafold and colabfold results☆33Updated last month
- ☆39Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆42Updated last year
- bakerlab pymol scripts☆26Updated 5 years ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆63Updated last month