jafetgado / EpHod
Machine learning prediction of enzyme optimum pH
☆10Updated last month
Alternatives and similar repositories for EpHod:
Users that are interested in EpHod are comparing it to the libraries listed below
- Machine learning prediction of enzyme optimum pH☆29Updated last month
- A domain parser for Alphafold models☆34Updated last year
- ☆22Updated last year
- ☆27Updated 2 weeks ago
- ML toolset for creating TED: The Encyclopedia of Domains☆15Updated 6 months ago
- Deep learning based prediction of temperature dependent enzyme turnover rates☆13Updated 3 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆26Updated 11 months ago
- PyDock Tutorial☆30Updated 6 years ago
- ☆25Updated 9 months ago
- ☆49Updated 9 months ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆42Updated 2 months ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆30Updated 7 months ago
- A foundation model approach to guide antimicrobial peptide design in the era of artificial intelligence driven scientific discovery☆16Updated this week
- ☆25Updated 7 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆27Updated 9 months ago
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆32Updated this week
- Active Learning-Assisted Directed Evolution for Protein Engineering☆41Updated 3 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆53Updated 3 months ago
- ☆19Updated 3 months ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆26Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆33Updated 3 months ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆14Updated 2 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆19Updated 2 weeks ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆36Updated 3 months ago
- ☆32Updated 5 months ago
- Structure-Informed Protein Language Model☆29Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆40Updated 2 years ago
- Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…☆20Updated 3 years ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆51Updated 11 months ago