lgatto / RforProteomicsLinks
Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
☆99Updated 3 months ago
Alternatives and similar repositories for RforProteomics
Users that are interested in RforProteomics are comparing it to the libraries listed below
Sorting:
- R package for analysing proteomics data☆50Updated 2 years ago
- Methods for label-free mass spectrometry proteomics☆15Updated 8 months ago
- The repo for LFQ-Analyst☆30Updated last year
- An S3 data object and framework for common quantitative proteomic analyses☆47Updated 5 months ago
- DEP package☆28Updated 3 years ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆25Updated 5 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- R package - MSstats☆87Updated last month
- Quantitative features for mass spectrometry data☆28Updated last month
- Protein Differential Abundance for Label-Free Mass Spectrometry https://const-ae.github.io/proDA/☆21Updated 2 years ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated last month
- Differential Expression Analysis tool box R lang package for omics data☆46Updated last month
- tidymass☆58Updated 2 months ago
- R package providing query functionality to BioMart instances like Ensembl☆43Updated last month
- Clone of the Bioconductor repository for the scater package.☆96Updated 9 months ago
- An R interface to enrichR☆93Updated 10 months ago
- Tools for manipulating annotated data matrices☆91Updated 4 years ago
- A package that provides data analysis pipeline for flow cytometry.☆79Updated 3 months ago
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Updated 2 years ago
- Proteomics Toolset for Integrative Data Analysis☆26Updated 2 months ago
- Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail☆79Updated last week
- An R client for broads firehose pipeline, providing TCGA data sets☆61Updated 6 years ago
- This is a read-only mirror of the CRAN R package repository. WGCNA — Weighted Correlation Network Analysis☆54Updated last year
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated 3 weeks ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 7 years ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆30Updated last year
- Bioconductor package for management of multi-assay data☆73Updated 3 weeks ago
- The bridge between the NCBI Gene Expression Omnibus and Bioconductor☆101Updated 2 weeks ago
- Topics In Data Science and Bioinformatics☆79Updated last year
- NAguideR: performing and prioritizing missing value imputations for consistent bottom-up proteomic analyses☆49Updated 3 months ago